RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 NSUN6Q8TEA1 469 aaKnown RBP15.95■□□□□ 0.14
CDH1-213ENST00000612417 STK33Q9BYT3 514 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 RRAGCQ9HB90 399 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 AGO4Q9HCK5 861 aaKnown RBP15.95■□□□□ 0.14
CDH1-213ENST00000612417 A1CFQ9NQ94 594 aaKnown RBP15.95■□□□□ 0.14
CDH1-213ENST00000612417 CYP39A1Q9NYL5 469 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 FAM153AQ9UHL3 310 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 LOC285556D6RIA3 1793 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 ESYT3A0FGR9 886 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 SFI1A8K8P3 1242 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 F8VZ95 297 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 PGRMC1O00264 195 aaKnown RBP15.94■□□□□ 0.14
CDH1-213ENST00000612417 NR3C2P08235 984 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 SOX5P35711 763 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 EMC10Q5UCC4 262 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 LBX2Q6XYB7 198 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 ANKRD35Q8N283 1001 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 ARL8AQ96BM9 186 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 NACC1Q96RE7 527 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.94■□□□□ 0.14
CDH1-213ENST00000612417 SYT11Q9BT88 431 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 CAPS2Q9BXY5 557 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 ASCC2Q9H1I8 757 aaPredicted RBP15.94■□□□□ 0.14
CDH1-213ENST00000612417 ISCUQ9H1K1 167 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 BTBD7Q9P203 1132 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 KCNH4Q9UQ05 1017 aa15.94■□□□□ 0.14
CDH1-213ENST00000612417 NCANO14594 1321 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 GRIN2DO15399 1336 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 CCDC188H7C350 402 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 EVI5O60447 810 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 GUCY2CP25092 1073 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 HSPA9P38646 679 aaKnown RBP15.93■□□□□ 0.14
CDH1-213ENST00000612417 CUL1Q13616 776 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 CFAP58Q5T655 872 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 FASTKD5Q7L8L6 764 aaKnown RBP15.93■□□□□ 0.14
CDH1-213ENST00000612417 HS2ST1Q7LGA3 356 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 MIER3Q7Z3K6 550 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 SLC9A9Q8IVB4 645 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 FAM178BQ8IXR5 827 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 METTL13Q8N6R0 699 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 CHST13Q8NET6 341 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 IFT81Q8WYA0 676 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 PIK3R5Q8WYR1 880 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 CCDC43Q96MW1 224 aaKnown RBP15.93■□□□□ 0.14
CDH1-213ENST00000612417 STRA6Q9BX79 667 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 AGTPBP1Q9UPW5 1226 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 SAMM50Q9Y512 469 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 KIAA1217Q5T5P2 1943 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 ZNF233A6NK53 670 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 CLGNO14967 610 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 EIF3HO15372 352 aaKnown RBP eCLIP15.93■□□□□ 0.14
CDH1-213ENST00000612417 MYBPC2Q14324 1141 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 ZC2HC1CQ53FD0 456 aaPredicted RBP15.93■□□□□ 0.14
CDH1-213ENST00000612417 LDLRAD1Q5T700 205 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 XRRA1Q6P2D8 792 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 GJB7Q6PEY0 223 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 PEX26Q7Z412 305 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 NCAPG2Q86XI2 1143 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 POLD4Q9HCU8 107 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 AGPAT3Q9NRZ7 376 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 TCEAL9Q9UHQ7 104 aa15.93■□□□□ 0.14
CDH1-213ENST00000612417 PPP1R37O75864 691 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 OSBPP22059 807 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 RFX1P22670 979 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 ITGB3BPQ13352 177 aaPredicted RBP15.92■□□□□ 0.14
CDH1-213ENST00000612417 NT5DC3Q86UY8 548 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 VSIG10LQ86VR7 867 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 BANK1Q8NDB2 785 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 LNX1Q8TBB1 728 aaPredicted RBP15.92■□□□□ 0.14
CDH1-213ENST00000612417 NEK9Q8TD19 979 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 HES6Q96HZ4 224 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 SPATC1LQ9H0A9 340 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 GOLPH3Q9H4A6 298 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 TBC1D22BQ9NU19 505 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 RSPH14Q9UHP6 348 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 TTC7AQ9ULT0 858 aaPredicted RBP15.92■□□□□ 0.14
CDH1-213ENST00000612417 FRMD4BQ9Y2L6 1034 aa15.92■□□□□ 0.14
CDH1-213ENST00000612417 NOC2LQ9Y3T9 749 aaKnown RBP15.92■□□□□ 0.14
CDH1-213ENST00000612417 CEP104O60308 925 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 ECHS1P30084 290 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 RNASE9P60153 205 aaKnown RBP15.91■□□□□ 0.14
CDH1-213ENST00000612417 ERVK-9P63128 1117 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 SNAPC2Q13487 334 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 RIOX2Q8IUF8 465 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 KLHL7Q8IXQ5 586 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 TMEM174Q8WUU8 243 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 GPR88Q9GZN0 384 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 WRAP73Q9P2S5 460 aaPredicted RBP15.91■□□□□ 0.14
CDH1-213ENST00000612417 FBXO40Q9UH90 709 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 ZBTB39O15060 712 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 DHX15O43143 795 aaKnown RBP15.91■□□□□ 0.14
CDH1-213ENST00000612417 KRT14P02533 472 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 TMEM253P0C7T8 217 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 CCDC172P0C7W6 258 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 GALCP54803 685 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 DRAP1Q14919 205 aaPredicted RBP15.91■□□□□ 0.14
CDH1-213ENST00000612417 DNAJC21Q5F1R6 531 aaKnown RBP15.91■□□□□ 0.14
CDH1-213ENST00000612417 NLRX1Q86UT6 975 aa15.91■□□□□ 0.14
CDH1-213ENST00000612417 U2AF1L4Q8WU68 220 aaKnown RBP15.91■□□□□ 0.14
CDH1-213ENST00000612417 RFFLQ8WZ73 363 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms