RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-223ENST00000612130 USP17L19D6RCP7 530 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 USP17L20D6RJB6 530 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 EYA4O95677 639 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 COILP38432 576 aaPredicted RBP14.78□□□□□ -0.04
UBE2F-223ENST00000612130 CCNG1P51959 295 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 ARHGAP4P98171 946 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 LMNB2Q03252 620 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 USP17L24Q0WX57 530 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 USP17L6PQ6QN14 398 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 UHMK1Q8TAS1 419 aaKnown RBP14.78□□□□□ -0.04
UBE2F-223ENST00000612130 KRT35Q92764 455 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 VTI1AQ96AJ9 217 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 AGPAT1Q99943 283 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 RUSC1Q9BVN2 902 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 WNT8AQ9H1J5 351 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 SLC5A4Q9NY91 659 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 CTTNBP2NLQ9P2B4 639 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 TMEM120BA0PK00 339 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 MTA2O94776 668 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 MSH2P43246 934 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 MYL7Q01449 175 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 MAP2K1Q02750 393 aaPredicted RBP14.78□□□□□ -0.04
UBE2F-223ENST00000612130 SF3A3Q12874 501 aaKnown RBP eCLIP14.78□□□□□ -0.04
UBE2F-223ENST00000612130 AADACL2Q6P093 401 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 VSTM1Q6UX27 236 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 CLEC10AQ8IUN9 316 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 CKAP2Q8WWK9 683 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 ARHGEF2Q92974 986 aaKnown RBP14.78□□□□□ -0.04
UBE2F-223ENST00000612130 FAM20AQ96MK3 541 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 UIMC1Q96RL1 719 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 POLR3CQ9BUI4 534 aaPredicted RBP14.78□□□□□ -0.04
UBE2F-223ENST00000612130 BHMT2Q9H2M3 363 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 CD209Q9NNX6 404 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 SEPT11Q9NVA2 429 aaKnown RBP14.78□□□□□ -0.04
UBE2F-223ENST00000612130 USP40Q9NVE5 1235 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 PRKAG3Q9UGI9 489 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 DBR1Q9UK59 544 aaKnown RBP14.78□□□□□ -0.04
UBE2F-223ENST00000612130 RABGAP1Q9Y3P9 1069 aa14.78□□□□□ -0.04
UBE2F-223ENST00000612130 DIAPH2O60879 1101 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 ECM2O94769 699 aaPredicted RBP14.77□□□□□ -0.04
UBE2F-223ENST00000612130 LUC7L3O95232 432 aaKnown RBP14.77□□□□□ -0.04
UBE2F-223ENST00000612130 KRT16P08779 473 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 CCNB1P14635 433 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 IL1R1P14778 569 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 SLC16A2P36021 539 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 PEX5P50542 639 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 ATP11AP98196 1134 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 KCNA1Q09470 495 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 CCDC15Q0P6D6 951 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 GRIK3Q13003 919 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 CALCOCO2Q13137 446 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 CBWD6Q4V339 395 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 CCDC38Q502W7 563 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 PRR16Q569H4 304 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 CBWD3Q5JTY5 395 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 CBWD5Q5RIA9 395 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 PALB2Q86YC2 1186 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 CCDC105Q8IYK2 499 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 ZDHHC14Q8IZN3 488 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 KIRREL3Q8IZU9 778 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 SLCO2A1Q92959 643 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 TRIM7Q9C029 511 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 WHRNQ9P202 907 aa14.77□□□□□ -0.04
UBE2F-223ENST00000612130 GREB1LQ9C091 1923 aaPredicted RBP14.77□□□□□ -0.04
UBE2F-223ENST00000612130 ECEL1O95672 775 aa14.77□□□□□ -0.05
UBE2F-223ENST00000612130 MARCKSL1P49006 195 aa14.77□□□□□ -0.05
UBE2F-223ENST00000612130 GPC5P78333 572 aa14.77□□□□□ -0.05
UBE2F-223ENST00000612130 MKRN4PQ13434 485 aaPredicted RBP14.77□□□□□ -0.05
UBE2F-223ENST00000612130 RRP1BQ14684 758 aaKnown RBP14.77□□□□□ -0.05
UBE2F-223ENST00000612130 QRICH1Q2TAL8 776 aa14.77□□□□□ -0.05
UBE2F-223ENST00000612130 NUGGCQ68CJ6 796 aa14.77□□□□□ -0.05
UBE2F-223ENST00000612130 RNF43Q68DV7 783 aa14.77□□□□□ -0.05
UBE2F-223ENST00000612130 LENG9Q96B70 501 aa14.77□□□□□ -0.05
UBE2F-223ENST00000612130 CDC42EP4Q9H3Q1 356 aaKnown RBP14.77□□□□□ -0.05
UBE2F-223ENST00000612130 PCDHA1Q9Y5I3 950 aa14.77□□□□□ -0.05
UBE2F-223ENST00000612130 ANKRD63C9JTQ0 380 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 SMNDC1O75940 238 aaKnown RBP eCLIP14.76□□□□□ -0.05
UBE2F-223ENST00000612130 FAM13AO94988 1023 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 BCRP11274 1271 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 ATP2A2P16615 1042 aaKnown RBP14.76□□□□□ -0.05
UBE2F-223ENST00000612130 PDE6BP35913 854 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 ACVR2BQ13705 512 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 NFIXQ14938 502 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 LRRC14Q15048 493 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 EP400NLQ6ZTU2 488 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 STXBP4Q6ZWJ1 553 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 HS2ST1Q7LGA3 356 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 SLC13A5Q86YT5 568 aaPredicted RBP14.76□□□□□ -0.05
UBE2F-223ENST00000612130 CD101Q93033 1021 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 GRAMD1AQ96CP6 724 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 DMAC2Q9NW81 257 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 SEL1LQ9UBV2 794 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 VAV3Q9UKW4 847 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 FRMD4BQ9Y2L6 1034 aa14.76□□□□□ -0.05
UBE2F-223ENST00000612130 MEIS2O14770 477 aa14.75□□□□□ -0.05
UBE2F-223ENST00000612130 TCEA3O75764 348 aa14.75□□□□□ -0.05
UBE2F-223ENST00000612130 MYCNP04198 464 aaPredicted RBP14.75□□□□□ -0.05
UBE2F-223ENST00000612130 POTEJP0CG39 1038 aa14.75□□□□□ -0.05
UBE2F-223ENST00000612130 COMTP21964 271 aa14.75□□□□□ -0.05
UBE2F-223ENST00000612130 ICA1Q05084 483 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms