RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 AFPP02771 609 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 PTPRAP18433 802 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 NR2F2P24468 414 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 PON1P27169 355 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 PPP2R5EQ16537 467 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 CCDC63Q8NA47 563 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 HAS1Q92839 578 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 KLRG1Q96E93 195 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 TRIM51Q9BSJ1 452 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 WDR18Q9BV38 432 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 EPB41L4BQ9H329 900 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 BAIAP2L1Q9UHR4 511 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 AMFRQ9UKV5 643 aa20.6■□□□□ 0.89
SEMA3B-210ENST00000611067 CFBP00751 764 aa20.59■□□□□ 0.89
SEMA3B-210ENST00000611067 FGGP02679 453 aa20.59■□□□□ 0.89
SEMA3B-210ENST00000611067 HOXA13P31271 388 aaPredicted RBP20.59■□□□□ 0.89
SEMA3B-210ENST00000611067 PTENP60484 403 aa20.59■□□□□ 0.89
SEMA3B-210ENST00000611067 ARHGAP4P98171 946 aa20.59■□□□□ 0.89
SEMA3B-210ENST00000611067 KCTD19Q17RG1 926 aaPredicted RBP20.59■□□□□ 0.89
SEMA3B-210ENST00000611067 ZNF280CQ8ND82 737 aa20.59■□□□□ 0.89
SEMA3B-210ENST00000611067 ZDHHC18Q9NUE0 388 aa20.59■□□□□ 0.89
SEMA3B-210ENST00000611067 DIS3Q9Y2L1 958 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-210ENST00000611067 SMCHD1A6NHR9 2005 aa20.59■□□□□ 0.89
SEMA3B-210ENST00000611067 CCDC169A6NNP5 214 aa20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 VCAM1P19320 739 aa20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 BACE1P56817 501 aa20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 DUPD1Q68J44 220 aa20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 MOXD1Q6UVY6 613 aa20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 LDHDQ86WU2 507 aa20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 SULF1Q8IWU6 871 aa20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 TRIM31Q9BZY9 425 aa20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 ADAM7Q9H2U9 754 aa20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 PABPC3Q9H361 631 aaKnown RBP20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 EBF2Q9HAK2 575 aa20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 ARMCX3Q9UH62 379 aaPredicted RBP20.58■□□□□ 0.89
SEMA3B-210ENST00000611067 SSC5DA1L4H1 1573 aa20.58■□□□□ 0.88
SEMA3B-210ENST00000611067 CFAP73A6NFT4 308 aa20.58■□□□□ 0.88
SEMA3B-210ENST00000611067 E9PMD0 336 aa20.58■□□□□ 0.88
SEMA3B-210ENST00000611067 SHBGP04278 402 aa20.58■□□□□ 0.88
SEMA3B-210ENST00000611067 PLA2G4BP0C869 781 aa20.58■□□□□ 0.88
SEMA3B-210ENST00000611067 GBP2P32456 591 aaPredicted RBP20.58■□□□□ 0.88
SEMA3B-210ENST00000611067 SLC8A3P57103 927 aa20.58■□□□□ 0.88
SEMA3B-210ENST00000611067 DGKZQ13574 1117 aa20.58■□□□□ 0.88
SEMA3B-210ENST00000611067 NEK9Q8TD19 979 aa20.58■□□□□ 0.88
SEMA3B-210ENST00000611067 CCDC134Q9H6E4 229 aa20.58■□□□□ 0.88
SEMA3B-210ENST00000611067 FRMD3A2A2Y4 597 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 DDX3XO00571 662 aaKnown RBP eCLIP20.57■□□□□ 0.881e-8■□□□□ 10.9
SEMA3B-210ENST00000611067 POLR2MP0CAP2 368 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 SREBF1P36956 1147 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 PMS2P54278 862 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 JAM2P57087 298 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 GPBP1Q86WP2 473 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 FAXDC2Q96IV6 333 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 RSRC1Q96IZ7 334 aaKnown RBP20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 SELENOSQ9BQE4 189 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 ERP44Q9BS26 406 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 SAMD15Q9P1V8 674 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 CCPG1Q9ULG6 757 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 PCDHA12Q9UN75 941 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 TRAF3IP3Q9Y228 551 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 ZHX2Q9Y6X8 837 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 SRCAPQ6ZRS2 3230 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 ICAM1P05362 532 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 CYP11B2P19099 503 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 CACNB1Q02641 598 aaPredicted RBP20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 PRKG1Q13976 671 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 MAB21L3Q8N8X9 362 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 CCHCR1Q8TD31 782 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 FAM212AQ96EL1 285 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 P2RX7Q99572 595 aaKnown RBP20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 RPAP3Q9H6T3 665 aaPredicted RBP20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 KIAA1024Q9UPX6 916 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 NR2E1Q9Y466 385 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 DAAM1Q9Y4D1 1078 aa20.57■□□□□ 0.88
SEMA3B-210ENST00000611067 CYP3A7-CYP3A51PA0A087WV96 503 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 NPHP3-ACAD11A0A0J9YXS1 232 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 CCDC189A1A4V9 331 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 FAM187AA6NFU0 413 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 CYP3A7P24462 503 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 DR1Q01658 176 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 DENND2CQ68D51 928 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 TRPM8Q7Z2W7 1104 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 LRRC34Q8IZ02 419 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 CRYGNQ8WXF5 182 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 TBC1D31Q96DN5 1066 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 CTDP1Q9Y5B0 961 aaPredicted RBP20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 DDX3YO15523 660 aaKnown RBP20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 BUB1BO60566 1050 aaPredicted RBP20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 RTN2O75298 545 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 RPSAP08865 295 aaKnown RBP20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 XRCC5P13010 732 aaKnown RBP20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 EPHA7Q15375 998 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 GPR162Q16538 588 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 FMNL3Q8IVF7 1028 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 NAP1L3Q99457 506 aaPredicted RBP20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 EHMT1Q9H9B1 1298 aa20.56■□□□□ 0.88
SEMA3B-210ENST00000611067 GFPT2O94808 682 aa20.55■□□□□ 0.88
SEMA3B-210ENST00000611067 GALCP54803 685 aa20.55■□□□□ 0.88
SEMA3B-210ENST00000611067 DRG2P55039 364 aaKnown RBP20.55■□□□□ 0.88
SEMA3B-210ENST00000611067 ACCSLQ4AC99 568 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms