RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ZNF280CQ8ND82 737 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 NSUN6Q8TEA1 469 aaKnown RBP11.3□□□□□ -0.6
PABPC1-224ENST00000610907 ATP6V0A1Q93050 837 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 FAM81BQ96LP2 452 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 GDAP1L1Q96MZ0 367 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 CBWD1Q9BRT8 395 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 CARD9Q9H257 536 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 PCIF1Q9H4Z3 704 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 HOMER2Q9NSB8 354 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 RNF146Q9NTX7 359 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 TBX20Q9UMR3 447 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 COQ4Q9Y3A0 265 aa11.3□□□□□ -0.6
PABPC1-224ENST00000610907 GOLGA6CA6NDK9 693 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 MIF4GDA9UHW6 222 aaKnown RBP11.29□□□□□ -0.6
PABPC1-224ENST00000610907 KRIT1O00522 736 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 SLC16A4O15374 487 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 SART1O43290 800 aaKnown RBP11.29□□□□□ -0.6
PABPC1-224ENST00000610907 RAD51CO43502 376 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 BUB1BO60566 1050 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-224ENST00000610907 RTN2O75298 545 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 CCNE2O96020 404 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 GOLGA6DP0CG33 693 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 DSG3P32926 999 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 MXI1P50539 228 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 DNA2P51530 1060 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 MFAP3P55082 362 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 DLG4P78352 724 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 DMP1Q13316 513 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-224ENST00000610907 BAATQ14032 418 aaPredicted RBP11.29□□□□□ -0.6
PABPC1-224ENST00000610907 ARHGAP44Q17R89 818 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 C1orf220Q5T0J3 134 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 CFAP58Q5T655 872 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 FAM102BQ5T8I3 360 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 C11orf63Q6NUN7 778 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 MAEAQ7L5Y9 396 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 MCPH1Q8NEM0 835 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 REPS2Q8NFH8 660 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 CASKIN2Q8WXE0 1202 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 IFT81Q8WYA0 676 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 KCNN1Q92952 543 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 FBXL18Q96ME1 805 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 PICK1Q9NRD5 415 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 GOLGA6AQ9NYA3 693 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 HACL1Q9UJ83 578 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 NFU1Q9UMS0 254 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 NOC2LQ9Y3T9 749 aaKnown RBP11.29□□□□□ -0.6
PABPC1-224ENST00000610907 MYPNQ86TC9 1320 aa11.29□□□□□ -0.6
PABPC1-224ENST00000610907 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 SHOX2O60902 331 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 DGAT1O75907 488 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 MTA2O94776 668 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 PSAPP07602 524 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 HSPA6P17066 643 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 CNGA1P29973 690 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 HSPA9P38646 679 aaKnown RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 NPTX2P47972 431 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 GCLMP48507 274 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 GMPSP49915 693 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 GPC3P51654 580 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 GPC5P78333 572 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 DOCK1Q14185 1865 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 SNRNP35Q16560 246 aaKnown RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 UGCGQ16739 394 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 EMC10Q5UCC4 262 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 KRT39Q6A163 491 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 ANO5Q75V66 913 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 APOBEC3FQ8IUX4 373 aaKnown RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 KLHL7Q8IXQ5 586 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 MICALL2Q8IY33 904 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 FAM71AQ8IYT1 594 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 SEC14L1Q92503 715 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 LRRC45Q96CN5 670 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 ATG4CQ96DT6 458 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 MFSD14AQ96MC6 490 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 RPS6KC1Q96S38 1066 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 TMEM117Q9H0C3 514 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 TMEM8AQ9HCN3 771 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 KMT5AQ9NQR1 393 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 CNOT7Q9UIV1 285 aaKnown RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 CCDC169A6NNP5 214 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 FZD9O00144 591 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 NFKBIEO00221 500 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 KIAA0391O15091 583 aaKnown RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 DDX3YO15523 660 aaKnown RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 ZC3H11AO75152 810 aaKnown RBP eCLIP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 PTPRAP18433 802 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 GARTP22102 1010 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 GNPTABQ3T906 1256 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 BRDTQ58F21 947 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 NBPF12Q5TAG4 269 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 LRIG3Q6UXM1 1119 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 ARHGEF19Q8IW93 802 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 TSEN2Q8NCE0 465 aaKnown RBP11.28□□□□□ -0.6
PABPC1-224ENST00000610907 PARD3BQ8TEW8 1205 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 RIN2Q8WYP3 895 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms