RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 PRPHP41219 470 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 ALDH7A1P49419 539 aaKnown RBP14.3□□□□□ -0.12
SNX20-205ENST00000610485 NDUFV1P49821 464 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 ECM1Q16610 540 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 DUSP6Q16828 381 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 NOTUMQ6P988 496 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 RBM23Q86U06 439 aaKnown RBP14.3□□□□□ -0.12
SNX20-205ENST00000610485 SMG8Q8ND04 991 aaKnown RBP14.3□□□□□ -0.12
SNX20-205ENST00000610485 CNNM3Q8NE01 707 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 TCF25Q9BQ70 676 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 TLE6Q9H808 572 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 RSAD1Q9HA92 442 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 NGRNQ9NPE2 291 aaKnown RBP14.3□□□□□ -0.12
SNX20-205ENST00000610485 CD320Q9NPF0 282 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 CLEC1BQ9P126 229 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 CD207Q9UJ71 328 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 INPP5FQ9Y2H2 1132 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 STK24Q9Y6E0 443 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 ARHGEF35A5YM69 484 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 MBTPS2O43462 519 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 ZC3H11AO75152 810 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNX20-205ENST00000610485 EYA4O95677 639 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 ARF4P18085 180 aaPredicted RBP14.29□□□□□ -0.12
SNX20-205ENST00000610485 CYP11B2P19099 503 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 CCT6AP40227 531 aaKnown RBP14.29□□□□□ -0.12
SNX20-205ENST00000610485 NCBP1Q09161 790 aaKnown RBP14.29□□□□□ -0.12
SNX20-205ENST00000610485 COASYQ13057 564 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 SMAD4Q13485 552 aaKnown RBP14.29□□□□□ -0.12
SNX20-205ENST00000610485 KCNC3Q14003 757 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 SMAD2Q15796 467 aaKnown RBP14.29□□□□□ -0.12
SNX20-205ENST00000610485 RILPL1Q5EBL4 403 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 PLPP4Q5VZY2 271 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 CDCA2Q69YH5 1023 aaPredicted RBP14.29□□□□□ -0.12
SNX20-205ENST00000610485 PADI6Q6TGC4 694 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 MAEAQ7L5Y9 396 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 URGCPQ8TCY9 931 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 CPB2Q96IY4 423 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 EIF2AQ9BY44 585 aaKnown RBP14.29□□□□□ -0.12
SNX20-205ENST00000610485 RAB34Q9BZG1 259 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 CSRNP2Q9H175 543 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 UBN1Q9NPG3 1134 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 ENTPD7Q9NQZ7 604 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 PRKAG3Q9UGI9 489 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 IPPQ9Y573 584 aa14.29□□□□□ -0.12
SNX20-205ENST00000610485 LRRIQ4A6NIV6 560 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 HIDE1A8MVS5 230 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 NT5C1B-RDH14C9J2C7 533 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 H3BQV1 296 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 PER2O15055 1255 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 INPPL1O15357 1258 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 B4GALT5O43286 388 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 B4GALT3O60512 393 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 GALTP07902 379 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 AFF1P51825 1210 aaKnown RBP14.28□□□□□ -0.12
SNX20-205ENST00000610485 RNASELQ05823 741 aaKnown RBP14.28□□□□□ -0.12
SNX20-205ENST00000610485 ZP2Q05996 745 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 CLUL1Q15846 466 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 IL17AQ16552 155 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 MCTP1Q6DN14 999 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 TMEM173Q86WV6 379 aaPredicted RBP14.28□□□□□ -0.12
SNX20-205ENST00000610485 GJD3Q8N144 294 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 SMRP1Q8NCR6 262 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 VN1R2Q8NFZ6 395 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 SNX29Q8TEQ0 813 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 BSNDQ8WZ55 320 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 TMEM169Q96HH4 297 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 PRIMPOLQ96LW4 560 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 KANSL3Q9P2N6 904 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 DNAJB4Q9UDY4 337 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 TCF20Q9UGU0 1960 aaKnown RBP14.28□□□□□ -0.12
SNX20-205ENST00000610485 SMC3Q9UQE7 1217 aa14.28□□□□□ -0.12
SNX20-205ENST00000610485 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.28□□□□□ -0.12
SNX20-205ENST00000610485 A0A1B0GUA9 196 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 DDHD2O94830 711 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 ITGA4P13612 1032 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 SLC11A1P49279 550 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 ATP2C1P98194 919 aaPredicted RBP14.27□□□□□ -0.13
SNX20-205ENST00000610485 SMC1AQ14683 1233 aaKnown RBP14.27□□□□□ -0.13
SNX20-205ENST00000610485 FAM187BQ17R55 369 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 SLC27A1Q6PCB7 646 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 TMEM184AQ6ZMB5 413 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 DTHD1Q6ZMT9 781 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 TMC7Q7Z402 723 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 ZNF280BQ86YH2 543 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 ZBTB8OSQ8IWT0 167 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 ADHFE1Q8IWW8 467 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 MRPL43Q8N983 215 aaKnown RBP14.27□□□□□ -0.13
SNX20-205ENST00000610485 BCL7CQ8WUZ0 217 aaPredicted RBP14.27□□□□□ -0.13
SNX20-205ENST00000610485 KHSRPQ92945 711 aaKnown RBP eCLIP14.27□□□□□ -0.13
SNX20-205ENST00000610485 IGSF21Q96ID5 467 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 TMEM175Q9BSA9 504 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 ZBP1Q9H171 429 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 C2orf40Q9H1Z8 148 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 BHMT2Q9H2M3 363 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 RNF39Q9H2S5 420 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 FZD8Q9H461 694 aa14.27□□□□□ -0.13
SNX20-205ENST00000610485 DDX19AQ9NUU7 478 aaKnown RBP14.27□□□□□ -0.13
SNX20-205ENST00000610485 PRMT7Q9NVM4 692 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms