RNA–Protein interactions for RNA: ENST00000610455.4

DEF8-228, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 1 (best) BASIC

Gene DEF8, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-228ENST00000610455 SPDYE4A6NLX3 237 aa19.56■□□□□ 0.72
DEF8-228ENST00000610455 CNPP09543 421 aaKnown RBP19.56■□□□□ 0.72
DEF8-228ENST00000610455 KLRC2P26717 231 aa19.56■□□□□ 0.72
DEF8-228ENST00000610455 INF2Q27J81 1249 aa19.56■□□□□ 0.72
DEF8-228ENST00000610455 MRPL10Q7Z7H8 261 aaKnown RBP19.56■□□□□ 0.72
DEF8-228ENST00000610455 DAGLBQ8NCG7 672 aa19.56■□□□□ 0.72
DEF8-228ENST00000610455 TMEM143Q96AN5 459 aa19.56■□□□□ 0.72
DEF8-228ENST00000610455 ACSF2Q96CM8 615 aaPredicted RBP19.56■□□□□ 0.72
DEF8-228ENST00000610455 JPH2Q9BR39 696 aaPredicted RBP19.56■□□□□ 0.72
DEF8-228ENST00000610455 LARP6Q9BRS8 491 aaKnown RBP19.56■□□□□ 0.72
DEF8-228ENST00000610455 RSAD1Q9HA92 442 aa19.56■□□□□ 0.72
DEF8-228ENST00000610455 WRAP73Q9P2S5 460 aaPredicted RBP19.56■□□□□ 0.72
DEF8-228ENST00000610455 LILRB3O75022 631 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 DEXIO95424 95 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 SRGAP2CP0DJJ0 459 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 HOXA11P31270 313 aaPredicted RBP19.55■□□□□ 0.72
DEF8-228ENST00000610455 NBL1P41271 181 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 QARSP47897 775 aaKnown RBP19.55■□□□□ 0.72
DEF8-228ENST00000610455 CLCN5P51795 746 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 PPP2R5CQ13362 524 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 NONOQ15233 471 aaKnown RBP eCLIP19.55■□□□□ 0.721e-6■■□□□ 13.1
DEF8-228ENST00000610455 UBXN11Q5T124 520 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 CWF19L1Q69YN2 538 aaKnown RBP19.55■□□□□ 0.72
DEF8-228ENST00000610455 CCDC149Q6ZUS6 474 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 RUFY3Q7L099 469 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 FLCNQ8NFG4 579 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 PRPF31Q8WWY3 499 aaKnown RBP19.55■□□□□ 0.72
DEF8-228ENST00000610455 SLC7A3Q8WY07 619 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 FAM193BQ96PV7 902 aaPredicted RBP19.55■□□□□ 0.72
DEF8-228ENST00000610455 EMILIN2Q9BXX0 1053 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 BMP2KQ9NSY1 1161 aaPredicted RBP19.55■□□□□ 0.72
DEF8-228ENST00000610455 VAV3Q9UKW4 847 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 FAN1Q9Y2M0 1017 aa19.55■□□□□ 0.72
DEF8-228ENST00000610455 PRR23AA6NEV1 266 aa19.54■□□□□ 0.72
DEF8-228ENST00000610455 NRP1O14786 923 aa19.54■□□□□ 0.72
DEF8-228ENST00000610455 POMCP01189 267 aa19.54■□□□□ 0.72
DEF8-228ENST00000610455 ALDH2P05091 517 aa19.54■□□□□ 0.72
DEF8-228ENST00000610455 LETM2Q2VYF4 491 aa19.54■□□□□ 0.72
DEF8-228ENST00000610455 OTOP3Q7RTS5 596 aa19.54■□□□□ 0.72
DEF8-228ENST00000610455 PSPC1Q8WXF1 523 aaKnown RBP19.54■□□□□ 0.72
DEF8-228ENST00000610455 CEP170P1Q96L14 293 aa19.54■□□□□ 0.72
DEF8-228ENST00000610455 TMEM175Q9BSA9 504 aa19.54■□□□□ 0.72
DEF8-228ENST00000610455 SLKQ9H2G2 1235 aaPredicted RBP19.54■□□□□ 0.72
DEF8-228ENST00000610455 DHX33Q9H6R0 707 aaKnown RBP19.54■□□□□ 0.72
DEF8-228ENST00000610455 MRPL17Q9NRX2 175 aaKnown RBP19.54■□□□□ 0.72
DEF8-228ENST00000610455 KCNJ14Q9UNX9 436 aa19.54■□□□□ 0.72
DEF8-228ENST00000610455 CNTNAP2Q9UHC6 1331 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 C2CD2LO14523 706 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 CPLX1O14810 134 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 PI15O43692 258 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 NPR3P17342 541 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 LAMTOR4Q0VGL1 99 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 TDGQ13569 410 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 GALNT17Q6IS24 598 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 SRGAP1Q7Z6B7 1085 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 KCNK12Q9HB15 430 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 ZSWIM6Q9HCJ5 1215 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 KCNMB3Q9NPA1 279 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 KANSL3Q9P2N6 904 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 STK39Q9UEW8 545 aa19.53■□□□□ 0.72
DEF8-228ENST00000610455 P4HBP07237 508 aaKnown RBP19.52■□□□□ 0.72
DEF8-228ENST00000610455 STK3Q13188 491 aa19.52■□□□□ 0.72
DEF8-228ENST00000610455 C15orf39Q6ZRI6 1047 aa19.52■□□□□ 0.72
DEF8-228ENST00000610455 TAS1R1Q7RTX1 841 aa19.52■□□□□ 0.72
DEF8-228ENST00000610455 KRT25Q7Z3Z0 450 aa19.52■□□□□ 0.72
DEF8-228ENST00000610455 FRMD5Q7Z6J6 570 aa19.52■□□□□ 0.72
DEF8-228ENST00000610455 SMG8Q8ND04 991 aaKnown RBP19.52■□□□□ 0.72
DEF8-228ENST00000610455 ZNF274Q96GC6 653 aaPredicted RBP19.52■□□□□ 0.72
DEF8-228ENST00000610455 FAM20AQ96MK3 541 aa19.52■□□□□ 0.72
DEF8-228ENST00000610455 MAN1C1Q9NR34 630 aa19.52■□□□□ 0.72
DEF8-228ENST00000610455 MARCH5Q9NX47 278 aa19.52■□□□□ 0.72
DEF8-228ENST00000610455 DUSP12Q9UNI6 340 aa19.52■□□□□ 0.72
DEF8-228ENST00000610455 DKC1O60832 514 aaKnown RBP eCLIP19.51■□□□□ 0.712e-6■■■□□ 16.1
DEF8-228ENST00000610455 N4BP1O75113 896 aaKnown RBP19.51■□□□□ 0.71
DEF8-228ENST00000610455 REC8O95072 547 aa19.51■□□□□ 0.71
DEF8-228ENST00000610455 SOD2P04179 222 aa19.51■□□□□ 0.71
DEF8-228ENST00000610455 NCLP19338 710 aaKnown RBP19.51■□□□□ 0.71
DEF8-228ENST00000610455 RFC5P40937 340 aa19.51■□□□□ 0.71
DEF8-228ENST00000610455 AK2P54819 239 aa19.51■□□□□ 0.71
DEF8-228ENST00000610455 RNF149Q8NC42 400 aa19.51■□□□□ 0.71
DEF8-228ENST00000610455 HAS1Q92839 578 aa19.51■□□□□ 0.71
DEF8-228ENST00000610455 LXNQ9BS40 222 aa19.51■□□□□ 0.71
DEF8-228ENST00000610455 EIF2AQ9BY44 585 aaKnown RBP19.51■□□□□ 0.71
DEF8-228ENST00000610455 RGL1Q9NZL6 768 aa19.51■□□□□ 0.71
DEF8-228ENST00000610455 PRG3Q9Y2Y8 225 aaPredicted RBP19.51■□□□□ 0.71
DEF8-228ENST00000610455 ZBTB39O15060 712 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 URODP06132 367 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 MYBP10242 640 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 AOC1P19801 751 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 YWHABP31946 246 aaKnown RBP19.5■□□□□ 0.71
DEF8-228ENST00000610455 EMC2Q15006 297 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 PPP4R3AQ6IN85 833 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 FERMT3Q86UX7 667 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 C4orf19Q8IY42 314 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 EXOC8Q8IYI6 725 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 COLGALT2Q8IYK4 626 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 FAM177A1Q8N128 213 aaPredicted RBP19.5■□□□□ 0.71
DEF8-228ENST00000610455 SIX5Q8N196 739 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 RPS6KC1Q96S38 1066 aa19.5■□□□□ 0.71
DEF8-228ENST00000610455 PHF20Q9BVI0 1012 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms