RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 USP20Q9Y2K6 914 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 RPTORQ8N122 1335 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 POU5F1Q01860 360 aaKnown RBP21.99■■□□□ 1.11
SSBP3-216ENST00000610401 AGBL2Q5U5Z8 902 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 FAM47EQ6ZV65 393 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 TAB3Q8N5C8 712 aaPredicted RBP21.99■■□□□ 1.11
SSBP3-216ENST00000610401 FAM129AQ9BZQ8 928 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 GPR88Q9GZN0 384 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 ZDHHC18Q9NUE0 388 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 GAKO14976 1311 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 CCT8L1PA6NM43 557 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 PIAS1O75925 651 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 CLNS1AP54105 237 aaKnown RBP21.99■■□□□ 1.11
SSBP3-216ENST00000610401 APOBEC3HQ6NTF7 200 aaKnown RBP21.99■■□□□ 1.11
SSBP3-216ENST00000610401 PPP1R18Q6NYC8 613 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 YTHDF3Q7Z739 585 aaKnown RBP21.99■■□□□ 1.11
SSBP3-216ENST00000610401 SLC47A2Q86VL8 602 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 TEKT1Q969V4 418 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 KIFC3Q9BVG8 833 aa21.99■■□□□ 1.11
SSBP3-216ENST00000610401 DHX38Q92620 1227 aaKnown RBP21.98■■□□□ 1.11
SSBP3-216ENST00000610401 SAAL1Q96ER3 474 aa21.98■■□□□ 1.11
SSBP3-216ENST00000610401 AGPAT1Q99943 283 aa21.98■■□□□ 1.11
SSBP3-216ENST00000610401 YY1AP1Q9H869 796 aa21.98■■□□□ 1.11
SSBP3-216ENST00000610401 GPRC5CQ9NQ84 441 aa21.98■■□□□ 1.11
SSBP3-216ENST00000610401 PNMA3Q9UL41 463 aa21.98■■□□□ 1.11
SSBP3-216ENST00000610401 PPP3CAQ08209 521 aa21.98■■□□□ 1.11
SSBP3-216ENST00000610401 HOMER2Q9NSB8 354 aa21.98■■□□□ 1.11
SSBP3-216ENST00000610401 ZMYM2Q9UBW7 1377 aa21.98■■□□□ 1.11
SSBP3-216ENST00000610401 UBOX5O94941 541 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 TMEM253P0C7T8 217 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 ARP10275 920 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 EZRP15311 586 aaKnown RBP21.97■■□□□ 1.11
SSBP3-216ENST00000610401 ADAM7Q9H2U9 754 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 TDRD3Q9H7E2 651 aaKnown RBP21.97■■□□□ 1.11
SSBP3-216ENST00000610401 COL22A1Q8NFW1 1626 aaPredicted RBP21.97■■□□□ 1.11
SSBP3-216ENST00000610401 PPFIA2O75334 1257 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 NEDD9Q14511 834 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 KYNUQ16719 465 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 SIAH1Q8IUQ4 282 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 KCNV2Q8TDN2 545 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 SLC24A3Q9HC58 644 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 SWAP70Q9UH65 585 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 CCDC169A6NNP5 214 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 EYA4O95677 639 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 ELF3P78545 371 aaPredicted RBP21.97■■□□□ 1.11
SSBP3-216ENST00000610401 SEL1L2Q5TEA6 688 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 PCDHB18PQ96TA0 734 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 NOD2Q9HC29 1040 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 RASAL2Q9UJF2 1139 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 VAV3Q9UKW4 847 aa21.97■■□□□ 1.11
SSBP3-216ENST00000610401 CRKP46108 304 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 PPATQ06203 517 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 GRHL1Q9NZI5 618 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 SUFUQ9UMX1 484 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 HIP1RO75146 1068 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 VCAM1P19320 739 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 CHKAP35790 457 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 SP4Q02446 784 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 SYDE2Q5VT97 1194 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 UBL4BQ8N7F7 174 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 SPIRE2Q8WWL2 714 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 PI4K2AQ9BTU6 479 aa21.96■■□□□ 1.11
SSBP3-216ENST00000610401 ACTR5Q9H9F9 607 aaPredicted RBP21.96■■□□□ 1.11
SSBP3-216ENST00000610401 TOPORSQ9NS56 1045 aaPredicted RBP21.96■■□□□ 1.11
SSBP3-216ENST00000610401 MTRF1LQ9UGC7 380 aaKnown RBP21.96■■□□□ 1.11
SSBP3-216ENST00000610401 NAV1Q8NEY1 1877 aa21.95■■□□□ 1.11
SSBP3-216ENST00000610401 ARHGEF35A5YM69 484 aa21.95■■□□□ 1.11
SSBP3-216ENST00000610401 ELF1P32519 619 aa21.95■■□□□ 1.11
SSBP3-216ENST00000610401 LMBRD2Q68DH5 695 aaPredicted RBP21.95■■□□□ 1.11
SSBP3-216ENST00000610401 KLHL11Q9NVR0 708 aa21.95■■□□□ 1.11
SSBP3-216ENST00000610401 A0A1W2PRG0 241 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 ANKRD62A6NC57 917 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 PPEF1O14829 653 aaPredicted RBP21.95■■□□□ 1.1
SSBP3-216ENST00000610401 RARAP10276 462 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 CYP4F22Q6NT55 531 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 ZNF720Q7Z2F6 126 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 OLIG1Q8TAK6 271 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 ZNF653Q96CK0 615 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 NUP85Q9BW27 656 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.95■■□□□ 1.13e-7■■■■□ 20.9
SSBP3-216ENST00000610401 BTNL10A8MVZ5 291 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 KRT5P13647 590 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 SOX10P56693 466 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 BFSP1Q12934 665 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 ABCB5Q2M3G0 1257 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 CCDC50Q8IVM0 306 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 ACER1Q8TDN7 264 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 ARHGEF2Q92974 986 aaKnown RBP21.95■■□□□ 1.1
SSBP3-216ENST00000610401 FBXO28Q9NVF7 368 aa21.95■■□□□ 1.1
SSBP3-216ENST00000610401 CALCOCO2Q13137 446 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 SLC17A8Q8NDX2 589 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 ATXN2LQ8WWM7 1075 aaKnown RBP21.94■■□□□ 1.1
SSBP3-216ENST00000610401 TLCD1Q96CP7 247 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 FAM163AQ96GL9 167 aaPredicted RBP21.94■■□□□ 1.1
SSBP3-216ENST00000610401 C9orf72Q96LT7 481 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 ZNF317Q96PQ6 595 aaPredicted RBP21.94■■□□□ 1.1
SSBP3-216ENST00000610401 LXNQ9BS40 222 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 CARD9Q9H257 536 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 TRPC6Q9Y210 931 aa21.94■■□□□ 1.1
SSBP3-216ENST00000610401 GSTTP1A0A1W2PQM5 241 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms