RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 F13A1P00488 732 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 RB1P06400 928 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 HSP90AA1P07900 732 aaKnown RBP14.11□□□□□ -0.15
CD9-212ENST00000610354 PLA2G4BP0C869 781 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 PLCG1P19174 1290 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 DNAJB1P25685 340 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 UBA7P41226 1012 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 NAMPTP43490 491 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 AFF1P51825 1210 aaKnown RBP14.11□□□□□ -0.15
CD9-212ENST00000610354 CAMK1Q14012 370 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 AGMOQ6ZNB7 445 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 CDR2LQ86X02 465 aaPredicted RBP14.11□□□□□ -0.15
CD9-212ENST00000610354 MICALL1Q8N3F8 863 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 LINC00301Q8NCQ3 95 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 CCSER1Q9C0I3 900 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 NT5C3AQ9H0P0 336 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 LMCD1Q9NZU5 365 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 PCDHB2Q9Y5E7 798 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 SFI1A8K8P3 1242 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 OFD1O75665 1012 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 SSBP05455 408 aaKnown RBP eCLIP14.1□□□□□ -0.15
CD9-212ENST00000610354 ITGB1P05556 798 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 GUCY2CP25092 1073 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 AXLP30530 894 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 RAD51AP2Q09MP3 1159 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 MCM6Q14566 821 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 FAM187BQ17R55 369 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 TAS1R3Q7RTX0 852 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 KCTD17Q8N5Z5 321 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 KLHL23Q8NBE8 558 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 COLGALT1Q8NBJ5 622 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 SPPL3Q8TCT6 385 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 KIFAP3Q92845 792 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 ALG13Q9NP73 1137 aaKnown RBP14.1□□□□□ -0.15
CD9-212ENST00000610354 PLAGL2Q9UPG8 496 aa14.1□□□□□ -0.15
CD9-212ENST00000610354 A0A087X0B3 334 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 A0A1B0GUA9 196 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 HOXA2O43364 376 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 GTPBP6O43824 516 aaPredicted RBP14.09□□□□□ -0.15
CD9-212ENST00000610354 B4GALT3O60512 393 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 ERLIN2O94905 339 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 NCLP19338 710 aaKnown RBP14.09□□□□□ -0.15
CD9-212ENST00000610354 NPTX2P47972 431 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 RAB27AP51159 221 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 PEX3P56589 373 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 PCBP1Q15365 356 aaKnown RBP eCLIP14.09□□□□□ -0.15
CD9-212ENST00000610354 FOXD4L6Q3SYB3 417 aaPredicted RBP14.09□□□□□ -0.15
CD9-212ENST00000610354 NT5DC1Q5TFE4 455 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 NOTUMQ6P988 496 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 FOXD4L3Q6VB84 417 aaPredicted RBP14.09□□□□□ -0.15
CD9-212ENST00000610354 RAD54LQ92698 747 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 SYMPKQ92797 1274 aaKnown RBP14.09□□□□□ -0.15
CD9-212ENST00000610354 P2RX5Q93086 422 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 MRPL38Q96DV4 380 aaKnown RBP14.09□□□□□ -0.15
CD9-212ENST00000610354 CALML4Q96GE6 196 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 CDK5RAP3Q96JB5 506 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 CHAMP1Q96JM3 812 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 PLVAPQ9BX97 442 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 PRMT7Q9NVM4 692 aaPredicted RBP14.09□□□□□ -0.15
CD9-212ENST00000610354 RWDD3Q9Y3V2 267 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 HES2Q9Y543 173 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 IPPQ9Y573 584 aa14.09□□□□□ -0.15
CD9-212ENST00000610354 TCHHQ07283 1943 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 PRKCBP05771 671 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 SKIP12755 728 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 PBX3P40426 434 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 DHX8Q14562 1220 aaKnown RBP14.08□□□□□ -0.16
CD9-212ENST00000610354 PPP2R5AQ15172 486 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 NAALADL2Q58DX5 795 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 EEF1DP3Q658K8 133 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 ZBTB8OSQ8IWT0 167 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 DEPTORQ8TB45 409 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 CCDC51Q96ER9 411 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 IFT74Q96LB3 600 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 C11orf84Q9BUA3 381 aaPredicted RBP14.08□□□□□ -0.16
CD9-212ENST00000610354 C2orf40Q9H1Z8 148 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 PDZD7Q9H5P4 517 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 TSHZ2Q9NRE2 1034 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 MIOSQ9NXC5 875 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 TRIP11Q15643 1979 aa14.08□□□□□ -0.16
CD9-212ENST00000610354 CNTNAP2Q9UHC6 1331 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 ACKR2O00590 384 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 SPTLC2O15270 562 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 NPTXRO95502 500 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 BRD1O95696 1058 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 LIG1P18858 919 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 IRS1P35568 1242 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 STK38Q15208 465 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 SPOUT1Q5T280 376 aaKnown RBP14.07□□□□□ -0.16
CD9-212ENST00000610354 GPBP1Q86WP2 473 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 ZNF280BQ86YH2 543 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 LRRC43Q8N309 656 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 KRI1Q8N9T8 703 aaKnown RBP14.07□□□□□ -0.16
CD9-212ENST00000610354 SLC17A8Q8NDX2 589 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 PGBD4Q96DM1 585 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 PRIMPOLQ96LW4 560 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 ZNF396Q96N95 335 aaPredicted RBP14.07□□□□□ -0.16
CD9-212ENST00000610354 NTPCRQ9BSD7 190 aaKnown RBP14.07□□□□□ -0.16
CD9-212ENST00000610354 CXCL16Q9H2A7 254 aa14.07□□□□□ -0.16
CD9-212ENST00000610354 NXF3Q9H4D5 531 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms