RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 SEPT6Q14141 434 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 JADE1Q6IE81 842 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 CCDC137Q6PK04 289 aaKnown RBP15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 MIPOL1Q8TD10 442 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 ZNF526Q8TF50 670 aaPredicted RBP15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 SPATA33Q96N06 139 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 LRRC1Q9BTT6 524 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 TXLNGQ9NUQ3 528 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 MAD2L2Q9UI95 211 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 CPSF3Q9UKF6 684 aaKnown RBP15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 ATP8B3O60423 1300 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 SRRM1Q8IYB3 904 aaKnown RBP15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 RNPC3Q96LT9 517 aaKnown RBP15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 HSPBP1Q9NZL4 362 aa15.21■□□□□ 0.03
PCDHB16-201ENST00000609684 HDLBPQ00341 1268 aaKnown RBP15.21■□□□□ 0.02
PCDHB16-201ENST00000609684 BAATQ14032 418 aaPredicted RBP15.21■□□□□ 0.02
PCDHB16-201ENST00000609684 SPOPLQ6IQ16 392 aa15.21■□□□□ 0.02
PCDHB16-201ENST00000609684 ZNF449Q6P9G9 518 aa15.21■□□□□ 0.02
PCDHB16-201ENST00000609684 PPP1R3GB7ZBB8 358 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 WDR46O15213 610 aaKnown RBP15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 KRT37O76014 449 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 MUM1L1Q5H9M0 696 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 RHOT1Q8IXI2 618 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 THOC1Q96FV9 657 aaKnown RBP15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 TRIM56Q9BRZ2 755 aaKnown RBP15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 PITPNM3Q9BZ71 974 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 FNDC3AQ9Y2H6 1198 aaKnown RBP15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 TARSL2A2RTX5 802 aaKnown RBP15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 CAV1Q03135 178 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 MORC4Q8TE76 937 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 APEX2Q9UBZ4 518 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 ZNF70Q9UC06 446 aaPredicted RBP15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 IP6K2Q9UHH9 426 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 MORC2Q9Y6X9 1032 aaPredicted RBP15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 TYW5A2RUC4 315 aaKnown RBP15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 FAM187AA6NFU0 413 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 GOLGA8CPA6NN73 597 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 OPHN1O60890 802 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 SSTR3P32745 418 aaPredicted RBP15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 FMO5P49326 533 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 PPP4CP60510 307 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 SPARCL1Q14515 664 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 EDRF1Q3B7T1 1238 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 TWF2Q6IBS0 349 aaKnown RBP15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 KIAA1841Q6NSI8 718 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 C1orf54Q8WWF1 131 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 VCPKMTQ9H867 229 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 MYBL1P10243 752 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 SMARCA1P28370 1054 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 SDC4P31431 198 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 FAM47EQ6ZV65 393 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 MAML1Q92585 1016 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 LPAR1Q92633 364 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 LCMT1Q9UIC8 334 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 FIS1Q9Y3D6 152 aa15.2■□□□□ 0.02
PCDHB16-201ENST00000609684 KDM6AO15550 1401 aaPredicted RBP15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 HUS1O60921 280 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 TRIM72Q6ZMU5 477 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 RAB44Q7Z6P3 723 aaPredicted RBP15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 TTC17Q96AE7 1141 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 MS4A14Q96JA4 679 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 STK33Q9BYT3 514 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 ESYT2A0FGR8 921 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 KLK7P49862 253 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 RWDD4Q6NW29 188 aaKnown RBP15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 MICALL2Q8IY33 904 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 MMP19Q99542 508 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 MLXIPLQ9NP71 852 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 FAM217BQ9NTX9 383 aaPredicted RBP15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 FBXL5Q9UKA1 691 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 FHOD1Q9Y613 1164 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 MAP2P11137 1827 aaKnown RBP15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 GALCP54803 685 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 COG2Q14746 738 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 BEST2Q8NFU1 509 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 NCAPGQ9BPX3 1015 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 DGAT1O75907 488 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 SLC9A1P19634 815 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 STX1BP61266 288 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 DUOXA2Q1HG44 320 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 ZC2HC1CQ53FD0 456 aaPredicted RBP15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 ELOA2Q8IYF1 753 aaPredicted RBP15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 RNF149Q8NC42 400 aa15.19■□□□□ 0.02
PCDHB16-201ENST00000609684 RPSAP08865 295 aaKnown RBP15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 ANXA13P27216 316 aa15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 STAT5BP51692 787 aa15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 PPP2R2AP63151 447 aa15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 HP1BP3Q5SSJ5 553 aaPredicted RBP15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 MYLK4Q86YV6 388 aaPredicted RBP15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 NUDCD1Q96RS6 583 aa15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 TEX13BQ9BXU2 312 aa15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 RTN2O75298 545 aa15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 KRT7P08729 469 aa15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 KPNA2P52292 529 aaKnown RBP15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 GPS1Q13098 491 aa15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 FAM151AQ8WW52 585 aa15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 KLHL8Q9P2G9 620 aaPredicted RBP15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 G3BP2Q9UN86 482 aaKnown RBP15.18■□□□□ 0.02
PCDHB16-201ENST00000609684 COPEO14579 308 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 294.6 ms