RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 DDX53Q86TM3 631 aaKnown RBP9.3□□□□□ -0.92
LINC01396-201ENST00000609099 LONP2Q86WA8 852 aa9.3□□□□□ -0.92
LINC01396-201ENST00000609099 FCHSD1Q86WN1 690 aa9.3□□□□□ -0.92
LINC01396-201ENST00000609099 ECHDC2Q86YB7 292 aa9.3□□□□□ -0.92
LINC01396-201ENST00000609099 TMC2Q8TDI7 906 aa9.3□□□□□ -0.92
LINC01396-201ENST00000609099 SMG7Q92540 1137 aaKnown RBP9.3□□□□□ -0.92
LINC01396-201ENST00000609099 IGSF21Q96ID5 467 aa9.3□□□□□ -0.92
LINC01396-201ENST00000609099 OSMRQ99650 979 aa9.3□□□□□ -0.92
LINC01396-201ENST00000609099 VAT1LQ9HCJ6 419 aa9.3□□□□□ -0.92
LINC01396-201ENST00000609099 MAN1C1Q9NR34 630 aa9.3□□□□□ -0.92
LINC01396-201ENST00000609099 DNAJB4Q9UDY4 337 aa9.3□□□□□ -0.92
LINC01396-201ENST00000609099 PCDHA1Q9Y5I3 950 aa9.3□□□□□ -0.92
LINC01396-201ENST00000609099 SMIM35A0A1B0GVV1 85 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 F8W810 466 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 TK2O00142 265 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 MAN2B1O00754 1011 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 INPPL1O15357 1258 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 ARHGAP6O43182 974 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 FIBPO43427 364 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 CYTH3O43739 400 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 PLA2G2AP14555 144 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 ITGB5P18084 799 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 SLC11A1P49279 550 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 HAND2P61296 217 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 NTHL1P78549 312 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 HSP90AB4PQ58FF6 505 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 MTHFD1LQ6UB35 978 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 TPRG1Q6ZUI0 275 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 GET4Q7L5D6 327 aaPredicted RBP9.29□□□□□ -0.92
LINC01396-201ENST00000609099 PI4K2BQ8TCG2 481 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 SENP7Q9BQF6 1050 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 NRDE2Q9H7Z3 1164 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 ECHDC1Q9NTX5 307 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 ERAP1Q9NZ08 941 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 GINS2Q9Y248 185 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 RAI2Q9Y5P3 530 aa9.29□□□□□ -0.92
LINC01396-201ENST00000609099 CHURC1-FNTBB4DL54 471 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 C1QL1O75973 258 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 FGAP02671 866 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 GALTP07902 379 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 SPATA31D3P0C874 917 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 CSRP1P21291 193 aaKnown RBP9.28□□□□□ -0.92
LINC01396-201ENST00000609099 FNTBP49356 437 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 SATB1Q01826 763 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 KIZQ2M2Z5 673 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 TCEAL6Q6IPX3 200 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 SPATA31D4Q6ZUB0 917 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 PNMA1Q8ND90 353 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 HNRNPLLQ8WVV9 542 aaKnown RBP9.28□□□□□ -0.92
LINC01396-201ENST00000609099 TCEAL3Q969E4 200 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 LRIG1Q96JA1 1093 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 MRPL9Q9BYD2 267 aaKnown RBP9.28□□□□□ -0.92
LINC01396-201ENST00000609099 PLA2G2FQ9BZM2 168 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 CHRDQ9H2X0 955 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 VPS45Q9NRW7 570 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 MAP3K20Q9NYL2 800 aaKnown RBP9.28□□□□□ -0.92
LINC01396-201ENST00000609099 BSNQ9UPA5 3926 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 NCANO14594 1321 aa9.28□□□□□ -0.92
LINC01396-201ENST00000609099 C4orf47A7E2U8 309 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 J3QKU1 62 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 K7ESF4 209 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 HYAL3O43820 417 aaPredicted RBP9.27□□□□□ -0.93
LINC01396-201ENST00000609099 RAB11FIP3O75154 756 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 SSBP05455 408 aaKnown RBP eCLIP9.27□□□□□ -0.93
LINC01396-201ENST00000609099 ZSCAN20P17040 1043 aaPredicted RBP9.27□□□□□ -0.93
LINC01396-201ENST00000609099 ATP4AP20648 1035 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 FGFR4P22455 802 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 ALX1Q15699 326 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 KIAA1211LQ6NV74 962 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 CACNA2D4Q7Z3S7 1137 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 ZNF589Q86UQ0 364 aaPredicted RBP9.27□□□□□ -0.93
LINC01396-201ENST00000609099 ZNF280BQ86YH2 543 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 TMEFF1Q8IYR6 380 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 RNF168Q8IYW5 571 aaPredicted RBP9.27□□□□□ -0.93
LINC01396-201ENST00000609099 LINC01465Q8N7H1 131 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 ENAHQ8N8S7 591 aaPredicted RBP9.27□□□□□ -0.93
LINC01396-201ENST00000609099 GIMAP8Q8ND71 665 aaPredicted RBP9.27□□□□□ -0.93
LINC01396-201ENST00000609099 LPPQ93052 612 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 UBL7Q96S82 380 aaPredicted RBP9.27□□□□□ -0.93
LINC01396-201ENST00000609099 SMARCAD1Q9H4L7 1026 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 MRPL17Q9NRX2 175 aaKnown RBP9.27□□□□□ -0.93
LINC01396-201ENST00000609099 MARCH5Q9NX47 278 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 PKD2L1Q9P0L9 805 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 SSX2IPQ9Y2D8 614 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 PCDHGA5Q9Y5G8 931 aa9.27□□□□□ -0.93
LINC01396-201ENST00000609099 PCNX2A6NKB5 2137 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 ANKRD17O75179 2603 aaKnown RBP9.26□□□□□ -0.93
LINC01396-201ENST00000609099 TEX28O15482 410 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 ZC3H11AO75152 810 aaKnown RBP eCLIP9.26□□□□□ -0.93
LINC01396-201ENST00000609099 STAM2O75886 525 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 EPN2O95208 641 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 VTNP04004 478 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 PRB1P04280 392 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 NTRK1P04629 796 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 ZFYP08048 801 aaPredicted RBP9.26□□□□□ -0.93
LINC01396-201ENST00000609099 FSHRP23945 695 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 USP17L6PQ6QN14 398 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 SAMD3Q8N6K7 520 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 RNF169Q8NCN4 708 aa9.26□□□□□ -0.93
LINC01396-201ENST00000609099 HDAC7Q8WUI4 952 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms