RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CTTNBP2NLQ9P2B4 639 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 P4HA2O15460 535 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 CYP3A4P08684 503 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 RARAP10276 462 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 ADAT2Q7Z6V5 191 aaKnown RBP24.07■■□□□ 1.44
SHANK2-220ENST00000608988 TBC1D1Q86TI0 1168 aaPredicted RBP24.07■■□□□ 1.44
SHANK2-220ENST00000608988 EIF2AK1Q9BQI3 630 aaKnown RBP24.07■■□□□ 1.44
SHANK2-220ENST00000608988 PARVGQ9HBI0 331 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 TMOD4Q9NZQ9 345 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 ARL2BPQ9Y2Y0 163 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 RTN2O75298 545 aa24.06■■□□□ 1.44
SHANK2-220ENST00000608988 GJB6O95452 261 aa24.06■■□□□ 1.44
SHANK2-220ENST00000608988 HLA-DOAP06340 250 aa24.06■■□□□ 1.44
SHANK2-220ENST00000608988 SCP2P22307 547 aa24.06■■□□□ 1.44
SHANK2-220ENST00000608988 COPB2P35606 906 aa24.06■■□□□ 1.44
SHANK2-220ENST00000608988 SKIV2L2P42285 1042 aaKnown RBP24.06■■□□□ 1.44
SHANK2-220ENST00000608988 COPS2P61201 443 aa24.06■■□□□ 1.44
SHANK2-220ENST00000608988 BNIP1Q12981 228 aa24.06■■□□□ 1.44
SHANK2-220ENST00000608988 TTC27Q6P3X3 843 aa24.06■■□□□ 1.44
SHANK2-220ENST00000608988 SYDE1Q6ZW31 735 aaPredicted RBP24.06■■□□□ 1.44
SHANK2-220ENST00000608988 PNMA8AQ86V59 439 aaPredicted RBP24.06■■□□□ 1.44
SHANK2-220ENST00000608988 ABCF3Q9NUQ8 709 aa24.06■■□□□ 1.44
SHANK2-220ENST00000608988 CLGNO14967 610 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 UBOX5O94941 541 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 POTEJP0CG39 1038 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 CALCOCO2Q13137 446 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 PICALMQ13492 652 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 FAM133BQ5BKY9 247 aaKnown RBP24.05■■□□□ 1.44
SHANK2-220ENST00000608988 EXOC3L1Q86VI1 746 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 CLEC10AQ8IUN9 316 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 MYCT1Q8N699 235 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 DYDC1Q8WWB3 177 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 AMNQ9BXJ7 453 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 ECT2Q9H8V3 914 aa24.05■■□□□ 1.44
SHANK2-220ENST00000608988 GNPATO15228 680 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 MSH4O15457 936 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 TCEA3O75764 348 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 WFS1O76024 890 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 GZMAP12544 262 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 CETN1Q12798 172 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 CBWD6Q4V339 395 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 CBWD3Q5JTY5 395 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 CBWD5Q5RIA9 395 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 C1orf186Q6ZWK4 172 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 SLC13A5Q86YT5 568 aaPredicted RBP24.04■■□□□ 1.44
SHANK2-220ENST00000608988 BANK1Q8NDB2 785 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 TMEM174Q8WUU8 243 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 CD101Q93033 1021 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 GPR101Q96P66 508 aaPredicted RBP24.04■■□□□ 1.44
SHANK2-220ENST00000608988 AGPAT3Q9NRZ7 376 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 SEPT11Q9NVA2 429 aaKnown RBP24.04■■□□□ 1.44
SHANK2-220ENST00000608988 USP40Q9NVE5 1235 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 TAS2R14Q9NYV8 317 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 SMIM23A6NLE4 172 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 KCNA1Q09470 495 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 CERKQ8TCT0 537 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 NSMCE1Q8WV22 266 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 RPGRQ92834 1020 aaKnown RBP24.04■■□□□ 1.44
SHANK2-220ENST00000608988 GRAMD1AQ96CP6 724 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 TBC1D31Q96DN5 1066 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 STAMBPL1Q96FJ0 436 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 LRRC19Q9H756 370 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 ARHGEF3Q9NR81 526 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 NYAP2Q9P242 653 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 AGAP1Q9UPQ3 857 aa24.04■■□□□ 1.44
SHANK2-220ENST00000608988 ANP32DO95626 131 aa24.03■■□□□ 1.44
SHANK2-220ENST00000608988 FTLP02792 175 aaPredicted RBP24.03■■□□□ 1.44
SHANK2-220ENST00000608988 MAN1A1P33908 653 aa24.03■■□□□ 1.44
SHANK2-220ENST00000608988 CAV1Q03135 178 aa24.03■■□□□ 1.44
SHANK2-220ENST00000608988 CCDC15Q0P6D6 951 aa24.03■■□□□ 1.44
SHANK2-220ENST00000608988 BFSP1Q12934 665 aa24.03■■□□□ 1.44
SHANK2-220ENST00000608988 CCDC105Q8IYK2 499 aa24.03■■□□□ 1.44
SHANK2-220ENST00000608988 CKAP2Q8WWK9 683 aa24.03■■□□□ 1.44
SHANK2-220ENST00000608988 PLVAPQ9BX97 442 aa24.03■■□□□ 1.44
SHANK2-220ENST00000608988 RXFP1Q9HBX9 757 aa24.03■■□□□ 1.44
SHANK2-220ENST00000608988 SPATA31A6Q5VVP1 1343 aa24.03■■□□□ 1.44
SHANK2-220ENST00000608988 FAM86B1E9PN63 330 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 LIN7AO14910 233 aaPredicted RBP24.02■■□□□ 1.44
SHANK2-220ENST00000608988 ECEL1O95672 775 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 FAM86B2P0C5J1 330 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 FGFR4P22455 802 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 ZNF720Q7Z2F6 126 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 CNBD1Q8NA66 436 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 LMO3Q8TAP4 145 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 KRT35Q92764 455 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 HSD17B14Q9BPX1 270 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 TRIM6Q9C030 488 aaPredicted RBP24.02■■□□□ 1.44
SHANK2-220ENST00000608988 USP20Q9Y2K6 914 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 FOXN3O00409 490 aaPredicted RBP24.02■■□□□ 1.44
SHANK2-220ENST00000608988 ITIH2P19823 946 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 COMTP21964 271 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 NMT1P30419 496 aaKnown RBP24.02■■□□□ 1.44
SHANK2-220ENST00000608988 IFNAR2P48551 515 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 CCNG1P51959 295 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 MYO1EQ12965 1108 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 NAA25Q14CX7 972 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 ACCSLQ4AC99 568 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 SPATA21Q7Z572 469 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 MAIP1Q8WWC4 291 aa24.02■■□□□ 1.44
SHANK2-220ENST00000608988 ARHGEF2Q92974 986 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms