RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 CNNM3Q8NE01 707 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 SPIRE2Q8WWL2 714 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 DDX12PQ92771 950 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 PGBD4Q96DM1 585 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 KIFC3Q9BVG8 833 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 TRAIPQ9BWF2 469 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 TRIM6Q9C030 488 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 TNMDQ9H2S6 317 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 FZD8Q9H461 694 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 ZNF576Q9H609 170 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 TMEM134Q9H6X4 195 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 GDPD2Q9HCC8 539 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 FAM105AQ9NUU6 356 aa17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 FNDC1Q4ZHG4 1894 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-213ENST00000602905 ACKR2O00590 384 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 N4BP3O15049 544 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 SLC16A4O15374 487 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 DGKIO75912 1065 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 ARF4P18085 180 aaPredicted RBP17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 SCP2P22307 547 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 ABCD1P33897 745 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 BTG3Q14201 252 aaPredicted RBP17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 TPRNQ4KMQ1 711 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 APBB1IPQ7Z5R6 666 aaPredicted RBP17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 HACE1Q8IYU2 909 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 FIBCD1Q8N539 461 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 DEFB123Q8N688 67 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 SLC17A8Q8NDX2 589 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 CPB2Q96IY4 423 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 ADPGKQ9BRR6 497 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 NTPCRQ9BSD7 190 aaKnown RBP17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 LAMA3Q16787 3333 aa17.64■□□□□ 0.41
PPFIA3-213ENST00000602905 NLRC5Q86WI3 1866 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 A0A1B0GVL5 298 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 A0A1W2PQ27 194 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 A0A1W2PQ64 194 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 A0A1W2PQD8 194 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 MYMKA6NI61 221 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 IDEP14735 1019 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 GAP43P17677 238 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 HOXA11P31270 313 aaPredicted RBP17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 E2F4Q16254 413 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 AMHR2Q16671 573 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 FAM178BQ8IXR5 827 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 CMTR2Q8IYT2 770 aaKnown RBP17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 RSPH1Q8WYR4 309 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 MRPS27Q92552 414 aaKnown RBP17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 IPO9Q96P70 1041 aaKnown RBP17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 CCDC113Q9H0I3 377 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 SEMA6BQ9H3T3 888 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 ARHGAP28Q9P2N2 729 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 USP25Q9UHP3 1055 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 PCDHB2Q9Y5E7 798 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 ADGRA3Q8IWK6 1321 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 CNTNAP2Q9UHC6 1331 aa17.63■□□□□ 0.41
PPFIA3-213ENST00000602905 LCHNA4D1U4 455 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 TBKBP1A7MCY6 615 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 K7ENM7 598 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 B4GALT5O43286 388 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 TRAK2O60296 914 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 ZNF623O75123 536 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 PFKFB1P16118 471 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 SYKP43405 635 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 ZNF131P52739 623 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 SLC27A1Q6PCB7 646 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 CCDC65Q8IXS2 484 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 FSIP1Q8NA03 581 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 SP7Q8TDD2 431 aaPredicted RBP17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 ZNF689Q96CS4 500 aaPredicted RBP17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 CCDC34Q96HJ3 373 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 FAM161BQ96MY7 647 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 SAMD11Q96NU1 681 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 TGS1Q96RS0 853 aaKnown RBP17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 MRPL4Q9BYD3 311 aaKnown RBP17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 TSHZ2Q9NRE2 1034 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 KBTBD4Q9NVX7 518 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 SEL1LQ9UBV2 794 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 RWDD3Q9Y3V2 267 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 RALGAPA2Q2PPJ7 1873 aa17.62■□□□□ 0.41
PPFIA3-213ENST00000602905 A0A1B0GUA9 196 aa17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 LINC01553A4QN01 128 aa17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 ITGA4P13612 1032 aa17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 NCKAP1LP55160 1127 aa17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 TAP1Q03518 808 aa17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 PAN2Q504Q3 1202 aaKnown RBP17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 SPOUT1Q5T280 376 aaKnown RBP17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 CRIPAKQ8N1N5 446 aa17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 TMEM161BQ8NDZ6 487 aa17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 STAMQ92783 540 aa17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 TMEM117Q9H0C3 514 aa17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 UBN1Q9NPG3 1134 aa17.61■□□□□ 0.41
PPFIA3-213ENST00000602905 NPTXRO95502 500 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 SLFN14P0C7P3 912 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 FGFR1P11362 822 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 ASIC1P78348 528 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 DCAF4L1Q3SXM0 396 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 HERC4Q5GLZ8 1057 aaPredicted RBP17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 ATF7IP2Q5U623 682 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 GLB1LQ6UWU2 654 aa17.6■□□□□ 0.41
PPFIA3-213ENST00000602905 Q7L0L9 218 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms