RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 TSNAXIP1Q2TAA8 658 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 TMX2Q9Y320 296 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 COQ9O75208 318 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 YBX3P16989 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 CLMNQ96JQ2 1002 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 GBP5Q96PP8 586 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 AP1M1Q9BXS5 423 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 C10orf71Q711Q0 1435 aa16.54■□□□□ 0.24
PPFIA3-206ENST00000602655 FAM237AA0A1B0GTK4 181 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 CEP104O60308 925 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 MRPS35P82673 323 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 RIPK1Q13546 671 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 MAIP1Q8WWC4 291 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 PRMT1Q99873 361 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 SYT15Q9BQS2 421 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 A6NHS1 94 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 NKRFO15226 690 aaKnown RBP eCLIP16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 POTEJP0CG39 1038 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 KIF11P52732 1056 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 HAS1Q92839 578 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 RAB34Q9BZG1 259 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 MLXIPLQ9NP71 852 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 ZNF232Q9UNY5 417 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 RIPK3Q9Y572 518 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 MAP3K13O43283 966 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 SLCO1A2P46721 670 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 TRIM42Q8IWZ5 723 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 ARL10Q8N8L6 244 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 RDH13Q8NBN7 331 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 DNAJC7Q99615 494 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 TUBGCP2Q9BSJ2 902 aa16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 NOC4LQ9BVI4 516 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-206ENST00000602655 CASZ1Q86V15 1759 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 MYMKA6NI61 221 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 M0R2N6 131 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 KCNK3O14649 394 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 FECHP22830 423 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 DNM2P50570 870 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 ZNF268Q14587 947 aaPredicted RBP16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 LRRC14Q15048 493 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 GPBP1Q86WP2 473 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 CD302Q8IX05 232 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 CSGALNACT2Q8N6G5 542 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 TEX9Q8N6V9 391 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 ZNF579Q8NAF0 562 aaKnown RBP16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 LARP4BQ92615 738 aaKnown RBP16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 DDX12PQ92771 950 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 DCPSQ96C86 337 aaKnown RBP16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 UBE2OQ9C0C9 1292 aaKnown RBP16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 BHMT2Q9H2M3 363 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 RWDD2AQ9UIY3 292 aa16.52■□□□□ 0.24
PPFIA3-206ENST00000602655 LGALS16A8MUM7 142 aa16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 ARP10275 920 aa16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 VCAM1P19320 739 aa16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 LMNB1P20700 586 aa16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 MAP1SQ66K74 1059 aaPredicted RBP16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 ANO7Q6IWH7 933 aa16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 PDXDC2PQ6P474 469 aa16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 CEP128Q6ZU80 1094 aa16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 IL31RAQ8NI17 732 aa16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 MMTAG2Q9BU76 263 aaKnown RBP16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 GDF3Q9NR23 364 aa16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 SCOCQ9UIL1 159 aa16.52■□□□□ 0.23
PPFIA3-206ENST00000602655 EDIL3O43854 480 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 ZBED6P86452 979 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 MFSD4BQ5TF39 518 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 MTHFD1LQ6UB35 978 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 ETNK1Q9HBU6 452 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 PLCB1Q9NQ66 1216 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 MYH10P35580 1976 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 GTPBP6O43824 516 aaPredicted RBP16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 RNASELQ05823 741 aaKnown RBP16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 C1QTNF12Q5T7M4 302 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 GALNT17Q6IS24 598 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 RUBCNQ92622 972 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 MYH6P13533 1939 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 SERPINB4P48594 390 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 GRB10Q13322 594 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 SNRNP48Q6IEG0 339 aaKnown RBP16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 TLR10Q9BXR5 811 aa16.51■□□□□ 0.23
PPFIA3-206ENST00000602655 MED24O75448 989 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 GSTA1P08263 222 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 DEUP1Q05D60 604 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 ADAM9Q13443 819 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 TAAR1Q96RJ0 339 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 WDR11Q9BZH6 1224 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 GALNT8Q9NY28 637 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 GPRC5DQ9NZD1 345 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 ADAM22Q9P0K1 906 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 ZMYND8Q9ULU4 1186 aaPredicted RBP16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 RSPH10B2B2RC85 870 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 ZNF263O14978 683 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 DAPK3O43293 454 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 GAS7O60861 476 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 RSPH10BP0C881 870 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 DYNC1I2Q13409 638 aaKnown RBP16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 ARL6IP4Q66PJ3 421 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms