RNA–Protein interactions for RNA: ENST00000602307.5

PTPN23-206, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 2

Gene PTPN23, Length 5,119 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-206ENST00000602307 PARD3BQ8TEW8 1205 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 CREB3O43889 395 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 VSNL1P62760 191 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 PDIA5Q14554 519 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 SF3B3Q15393 1217 aaKnown RBP12.88□□□□□ -0.35
PTPN23-206ENST00000602307 PRR5LQ6MZQ0 368 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 BZW1Q7L1Q6 419 aaKnown RBP12.88□□□□□ -0.35
PTPN23-206ENST00000602307 AGPAT5Q9NUQ2 364 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 AMACRQ9UHK6 382 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 HERC5Q9UII4 1024 aaKnown RBP12.88□□□□□ -0.35
PTPN23-206ENST00000602307 ARHGEF37A1IGU5 675 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 ZNF185O15231 689 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 CYP26A1O43174 497 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 GUCY2CP25092 1073 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 SDC4P31431 198 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 FXR1P51114 621 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTPN23-206ENST00000602307 SPARCL1Q14515 664 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 FBXL13Q8NEE6 735 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 SPATA33Q96N06 139 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 AGO2Q9UKV8 859 aaKnown RBP12.88□□□□□ -0.35
PTPN23-206ENST00000602307 NOC2LQ9Y3T9 749 aaKnown RBP12.88□□□□□ -0.35
PTPN23-206ENST00000602307 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 ATP8B3O60423 1300 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 CTDNEP1O95476 244 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 SOX5P35711 763 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 PMS2P54278 862 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 TRIM67Q6ZTA4 783 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 ADSSL1Q8N142 457 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 FGD4Q96M96 766 aa12.88□□□□□ -0.35
PTPN23-206ENST00000602307 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
PTPN23-206ENST00000602307 SMIM24O75264 130 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 ELF1P32519 619 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 TNFAIP2Q03169 654 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 ART3Q13508 389 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 TTLL4Q14679 1199 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 SPATA4Q8NEY3 305 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 EPS15L1Q9UBC2 864 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 PPARGC1AQ9UBK2 798 aaKnown RBP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 KPNA2P52292 529 aaKnown RBP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 GPS1Q13098 491 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 CCDC137Q6PK04 289 aaKnown RBP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 NOP9Q86U38 636 aaKnown RBP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 PPM1NQ8N819 430 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 CDC26Q8NHZ8 85 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 GNGT2O14610 69 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 MAPK13O15264 365 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 YWHABP31946 246 aaKnown RBP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 OCRLQ01968 901 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 DPYDQ12882 1025 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 MTMR2Q13614 643 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 TTC13Q8NBP0 860 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 RFFLQ8WZ73 363 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 STRIP2Q9ULQ0 834 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 RIMBP3CA6NJZ7 1639 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 RIMBP3BA6NNM3 1639 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 RIMBP3Q9UFD9 1639 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 CD163L1Q9NR16 1453 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 SPECC1L-ADORA2AF8WAN1 911 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 TRPA1O75762 1119 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 TBXAS1P24557 533 aaPredicted RBP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 BEND6Q5SZJ8 279 aaPredicted RBP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 ATG16L1Q676U5 607 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 ANKRD7Q92527 254 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 MRPL4Q9BYD3 311 aaKnown RBP12.87□□□□□ -0.35
PTPN23-206ENST00000602307 SLC9A2Q9UBY0 812 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 ITSN1Q15811 1721 aa12.87□□□□□ -0.35
PTPN23-206ENST00000602307 GOLGA8QA0A0J9YX86 632 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 A0A1B0GTH6 734 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 GOLGA8OA6NCC3 632 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 MYMKA6NI61 221 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 GOLGA8NF8WBI6 632 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 PDXKO00764 312 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 HSPA4LO95757 839 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 LRRC14Q15048 493 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 HVCN1Q96D96 273 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 VPS39Q96JC1 886 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 CYTH2Q99418 400 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 VPS11Q9H270 941 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 POLIQ9UNA4 740 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 USH1CQ9Y6N9 552 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 ADORA2BP29275 332 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 RFX5P48382 616 aaPredicted RBP12.86□□□□□ -0.35
PTPN23-206ENST00000602307 GRIN1Q05586 938 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 FAM102AQ5T9C2 384 aaPredicted RBP12.86□□□□□ -0.35
PTPN23-206ENST00000602307 EPM2AIP1Q7L775 607 aaPredicted RBP12.86□□□□□ -0.35
PTPN23-206ENST00000602307 FRMD5Q7Z6J6 570 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 BEST2Q8NFU1 509 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 MS4A14Q96JA4 679 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 TMEM60Q9H2L4 133 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 SLITRK6Q9H5Y7 841 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 NCOA3Q9Y6Q9 1424 aa12.86□□□□□ -0.35
PTPN23-206ENST00000602307 NVLO15381 856 aaKnown RBP12.86□□□□□ -0.35
PTPN23-206ENST00000602307 RASA1P20936 1047 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms