RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 KANK3Q6NY19 840 aa19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 ELMSAN1Q6PJG2 1045 aa19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 KREMEN2Q8NCW0 462 aa19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 FEZF2Q8TBJ5 459 aa19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 PRPF31Q8WWY3 499 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 ATOH1Q92858 354 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 CCDC51Q96ER9 411 aa19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 SNX27Q96L92 541 aa19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 DAXXQ9UER7 740 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 TMEM150BA6NC51 233 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 EML1O00423 815 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 ST18O60284 1047 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 CCNT1O60563 726 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 STK3Q13188 491 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 CYP26C1Q6V0L0 522 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 CABP7Q86V35 215 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 SLC22A17Q8WUG5 538 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 SH2D3AQ9BRG2 576 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 POMKQ9H5K3 350 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 RSAD1Q9HA92 442 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 FAN1Q9Y2M0 1017 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 MYO10Q9HD67 2058 aa19.9■□□□□ 0.78
SHKBP1-227ENST00000602011 C2CD4DB7Z1M9 353 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 SLC37A4O43826 429 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 C1RP00736 705 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 SRGAP2CP0DJJ0 459 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 NCLP19338 710 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 YWHABP31946 246 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 NPEPPSP55786 919 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 LAMTOR4Q0VGL1 99 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 KSR1Q8IVT5 923 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 C12orf76Q8N812 135 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 TDRD5Q8NAT2 981 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 LPPQ93052 612 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 ACSF2Q96CM8 615 aaPredicted RBP19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 SFXN1Q9H9B4 322 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 BRMS1Q9HCU9 246 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 DBR1Q9UK59 544 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 KCNJ14Q9UNX9 436 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 INPP5FQ9Y2H2 1132 aa19.89■□□□□ 0.77
SHKBP1-227ENST00000602011 PFKFB2O60825 505 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 EIF5BO60841 1220 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 NR1I2O75469 434 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 BRD1O95696 1058 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 HOXA11P31270 313 aaPredicted RBP19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 ANAPC15P60006 121 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 SCRN1Q12765 414 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 TFDP1Q14186 410 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 RARS2Q5T160 578 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 PLA2G4FQ68DD2 849 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 AGMOQ6ZNB7 445 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 C15orf39Q6ZRI6 1047 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 FERMT3Q86UX7 667 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 HACE1Q8IYU2 909 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 AUTS2Q8WXX7 1259 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 HAS1Q92839 578 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 AIFM3Q96NN9 605 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 LXNQ9BS40 222 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 MRPL17Q9NRX2 175 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 WDR81Q562E7 1941 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 MYO15AQ9UKN7 3530 aa19.88■□□□□ 0.77
SHKBP1-227ENST00000602011 ERLIN2O94905 339 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 LYPLA2O95372 231 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 ASGR2P07307 311 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 KLRC2P26717 231 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 SLC11A1P49279 550 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 PTPN14Q15678 1187 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 XKR9Q5GH70 373 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 PIK3AP1Q6ZUJ8 805 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 OTOP3Q7RTS5 596 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 GPR149Q86SP6 731 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 GPR65Q8IYL9 337 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 RNF149Q8NC42 400 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 MTRQ99707 1265 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 RHOBTB2Q9BYZ6 727 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 PLXNA3P51805 1871 aa19.87■□□□□ 0.77
SHKBP1-227ENST00000602011 INPPL1O15357 1258 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 XRCC6P12956 609 aaKnown RBP eCLIP19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 ITGA4P13612 1032 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 LONRF3Q496Y0 759 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 NOTUMQ6P988 496 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 TMEM173Q86WV6 379 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 ZNF280BQ86YH2 543 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 IFNLR1Q8IU57 520 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 TMEM105Q8N8V8 129 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 TMEM143Q96AN5 459 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 KLHL5Q96PQ7 755 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 GBP3Q9H0R5 595 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 ANKEF1Q9NU02 776 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 DNAJB4Q9UDY4 337 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 PCDHA12Q9UN75 941 aa19.86■□□□□ 0.77
SHKBP1-227ENST00000602011 PTPRZ1P23471 2315 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-227ENST00000602011 LILRB3O75022 631 aa19.85■□□□□ 0.77
SHKBP1-227ENST00000602011 DGAT1O75907 488 aa19.85■□□□□ 0.77
SHKBP1-227ENST00000602011 SOD2P04179 222 aa19.85■□□□□ 0.77
SHKBP1-227ENST00000602011 EPCAMP16422 314 aa19.85■□□□□ 0.77
SHKBP1-227ENST00000602011 PTENP60484 403 aa19.85■□□□□ 0.77
SHKBP1-227ENST00000602011 EMC2Q15006 297 aa19.85■□□□□ 0.77
SHKBP1-227ENST00000602011 CMASQ8NFW8 434 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-227ENST00000602011 HDAC7Q8WUI4 952 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms