RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 CDC42EP1Q00587 391 aa19.66■□□□□ 0.74
VRK3-225ENST00000601912 TBX2Q13207 712 aaPredicted RBP19.66■□□□□ 0.74
VRK3-225ENST00000601912 HSP90AA2PQ14568 343 aaPredicted RBP19.66■□□□□ 0.74
VRK3-225ENST00000601912 ERGIC2Q96RQ1 377 aa19.66■□□□□ 0.74
VRK3-225ENST00000601912 DDX20Q9UHI6 824 aaKnown RBP19.66■□□□□ 0.74
VRK3-225ENST00000601912 TRIM17Q9Y577 477 aa19.66■□□□□ 0.74
VRK3-225ENST00000601912 KIAA0391O15091 583 aaKnown RBP19.65■□□□□ 0.74
VRK3-225ENST00000601912 MAPK13O15264 365 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 MSCO60682 206 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 ADAMTS4O75173 837 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 GJB1P08034 283 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 KRT13P13646 458 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 ADSSP30520 456 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 GRK4P32298 578 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 PTENP60484 403 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 DCAF17Q5H9S7 520 aaPredicted RBP19.65■□□□□ 0.74
VRK3-225ENST00000601912 TCERG1LQ5VWI1 586 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 INTS8Q75QN2 995 aaKnown RBP19.65■□□□□ 0.74
VRK3-225ENST00000601912 LRRC8AQ8IWT6 810 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 RDH13Q8NBN7 331 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 BORCS6Q96GS4 357 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 PCMTD1Q96MG8 357 aaPredicted RBP19.65■□□□□ 0.74
VRK3-225ENST00000601912 NUP58Q9BVL2 599 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 MRPL4Q9BYD3 311 aaKnown RBP19.65■□□□□ 0.74
VRK3-225ENST00000601912 CCDC113Q9H0I3 377 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 TSKSQ9UJT2 592 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 C17orf102A2RUQ5 167 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 MBLAC1A4D2B0 266 aaPredicted RBP19.65■□□□□ 0.74
VRK3-225ENST00000601912 NRDCO43847 1150 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 AFPP02771 609 aaKnown RBP19.65■□□□□ 0.74
VRK3-225ENST00000601912 INHAP05111 366 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 KCNH2Q12809 1159 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 SYCP1Q15431 976 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 SLC39A4Q6P5W5 647 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 ZPBP2Q6X784 338 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 KIAA0319LQ8IZA0 1049 aa19.65■□□□□ 0.74
VRK3-225ENST00000601912 PCSK9Q8NBP7 692 aaKnown RBP19.65■□□□□ 0.74
VRK3-225ENST00000601912 ZNF830Q96NB3 372 aaPredicted RBP19.65■□□□□ 0.74
VRK3-225ENST00000601912 SMIM35A0A1B0GVV1 85 aa19.64■□□□□ 0.73
VRK3-225ENST00000601912 INO80B-WBP1J3KQ70 363 aa19.64■□□□□ 0.73
VRK3-225ENST00000601912 VTNP04004 478 aa19.64■□□□□ 0.73
VRK3-225ENST00000601912 MYCNP04198 464 aaPredicted RBP19.64■□□□□ 0.73
VRK3-225ENST00000601912 PRKCBP05771 671 aa19.64■□□□□ 0.73
VRK3-225ENST00000601912 CST5P28325 142 aaPredicted RBP19.64■□□□□ 0.73
VRK3-225ENST00000601912 CXCL17Q6UXB2 119 aa19.64■□□□□ 0.73
VRK3-225ENST00000601912 CACTINQ8WUQ7 758 aaKnown RBP19.64■□□□□ 0.73
VRK3-225ENST00000601912 IQCDQ96DY2 449 aa19.64■□□□□ 0.73
VRK3-225ENST00000601912 SCLT1Q96NL6 688 aa19.64■□□□□ 0.73
VRK3-225ENST00000601912 TARS2Q9BW92 718 aaKnown RBP19.64■□□□□ 0.73
VRK3-225ENST00000601912 INO80BQ9C086 356 aaPredicted RBP19.64■□□□□ 0.73
VRK3-225ENST00000601912 KIAA1586Q9HCI6 787 aa19.64■□□□□ 0.73
VRK3-225ENST00000601912 HMX1Q9NP08 348 aaPredicted RBP19.64■□□□□ 0.73
VRK3-225ENST00000601912 STYXL1Q9Y6J8 313 aa19.64■□□□□ 0.73
VRK3-225ENST00000601912 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.64■□□□□ 0.735e-6■■■■□ 19.3
VRK3-225ENST00000601912 AKR1B15C9JRZ8 316 aaPredicted RBP19.63■□□□□ 0.73
VRK3-225ENST00000601912 CYP2C9P11712 490 aa19.63■□□□□ 0.73
VRK3-225ENST00000601912 MATR3P43243 847 aaKnown RBP eCLIP19.63■□□□□ 0.73
VRK3-225ENST00000601912 RNF180Q86T96 592 aa19.63■□□□□ 0.73
VRK3-225ENST00000601912 ZNF410Q86VK4 478 aa19.63■□□□□ 0.73
VRK3-225ENST00000601912 IFNLR1Q8IU57 520 aaPredicted RBP19.63■□□□□ 0.73
VRK3-225ENST00000601912 GPD1LQ8N335 351 aa19.63■□□□□ 0.73
VRK3-225ENST00000601912 KLHDC9Q8NEP7 349 aa19.63■□□□□ 0.73
VRK3-225ENST00000601912 NLRP7Q8WX94 980 aa19.63■□□□□ 0.73
VRK3-225ENST00000601912 SLC35C1Q96A29 364 aa19.63■□□□□ 0.73
VRK3-225ENST00000601912 ZNF668Q96K58 619 aaPredicted RBP19.63■□□□□ 0.73
VRK3-225ENST00000601912 FZD8Q9H461 694 aa19.63■□□□□ 0.73
VRK3-225ENST00000601912 HDAC6Q9UBN7 1215 aa19.63■□□□□ 0.73
VRK3-225ENST00000601912 A0A087WZ62 844 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 ACKR2O00590 384 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 TRIM21P19474 475 aaKnown RBP19.62■□□□□ 0.73
VRK3-225ENST00000601912 ADAM17P78536 824 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 RBL2Q08999 1139 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 BFSP1Q12934 665 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 ARID5BQ14865 1188 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 SNRNP35Q16560 246 aaKnown RBP19.62■□□□□ 0.73
VRK3-225ENST00000601912 USP37Q86T82 979 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 CNGA4Q8IV77 575 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 CPLX3Q8WVH0 158 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 FBXL18Q96ME1 805 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 FDXACB1Q9BRP7 624 aaPredicted RBP19.62■□□□□ 0.73
VRK3-225ENST00000601912 FAM49AQ9H0Q0 323 aaPredicted RBP19.62■□□□□ 0.73
VRK3-225ENST00000601912 IFT122Q9HBG6 1241 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 PRMT7Q9NVM4 692 aaPredicted RBP19.62■□□□□ 0.73
VRK3-225ENST00000601912 ZKSCAN5Q9Y2L8 839 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 PTCH2Q9Y6C5 1203 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 SIP14410 1827 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 PCNTO95613 3336 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 GOLGA8IPA6NC78 632 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 GOLGA8JA6NMD2 632 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 TOM1L1O75674 476 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 LDHAP00338 332 aaKnown RBP19.62■□□□□ 0.73
VRK3-225ENST00000601912 ASGR1P07306 291 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 GPC3P51654 580 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 NLRP11P59045 1033 aaKnown RBP19.62■□□□□ 0.73
VRK3-225ENST00000601912 C1QTNF8P60827 252 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 MBTD1Q05BQ5 628 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 PRPF4BQ13523 1007 aaKnown RBP19.62■□□□□ 0.73
VRK3-225ENST00000601912 KCNA10Q16322 511 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 ZSCAN30Q86W11 494 aa19.62■□□□□ 0.73
VRK3-225ENST00000601912 ZNF710Q8N1W2 664 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms