RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 MTERF2Q49AM1 385 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 ZC3H14Q6PJT7 736 aaKnown RBP18.04■□□□□ 0.48
SSBP4-211ENST00000601614 SYNE3Q6ZMZ3 975 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 RPS6KC1Q96S38 1066 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 RHOBTB2Q9BYZ6 727 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 ZMYND12Q9H0C1 365 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 UNC45AQ9H3U1 944 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 PCDHB2Q9Y5E7 798 aa18.04■□□□□ 0.48
SSBP4-211ENST00000601614 ZBTB43O43298 467 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 EFEMP2O95967 443 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 SOD2P04179 222 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 SPATA31D3P0C874 917 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 SKIP12755 728 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 RAB27AP51159 221 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 AK2P54819 239 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 NONOQ15233 471 aaKnown RBP eCLIP18.03■□□□□ 0.481e-6■■■■□ 20.3
SSBP4-211ENST00000601614 PFKFB3Q16875 520 aaPredicted RBP18.03■□□□□ 0.48
SSBP4-211ENST00000601614 SPATA31D4Q6ZUB0 917 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 RNF168Q8IYW5 571 aaPredicted RBP18.03■□□□□ 0.48
SSBP4-211ENST00000601614 PJA1Q8NG27 643 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 SMG7Q92540 1137 aaKnown RBP18.03■□□□□ 0.48
SSBP4-211ENST00000601614 STAMQ92783 540 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 RPP25Q9BUL9 199 aaKnown RBP18.03■□□□□ 0.48
SSBP4-211ENST00000601614 HERC2P3Q9BVR0 1158 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 SEPT9Q9UHD8 586 aaPredicted RBP18.03■□□□□ 0.48
SSBP4-211ENST00000601614 FAN1Q9Y2M0 1017 aa18.03■□□□□ 0.48
SSBP4-211ENST00000601614 ESYT2A0FGR8 921 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 GOLGA8AA7E2F4 631 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 GOLGA8BA8MQT2 603 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 ANHXE9PGG2 379 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 F8W810 466 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 PAPLNO95428 1278 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 POMCP01189 267 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 ALDH2P05091 517 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 URODP06132 367 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 LAMP2P13473 410 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 EXOSC10Q01780 885 aaKnown RBP18.02■□□□□ 0.48
SSBP4-211ENST00000601614 HTR4Q13639 388 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 KIAA0319Q5VV43 1072 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 DCLRE1AQ6PJP8 1040 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 CATSPER4Q7RTX7 472 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 ZNF410Q86VK4 478 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 RHPN2Q8IUC4 686 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 REXO1Q8N1G1 1221 aaKnown RBP18.02■□□□□ 0.48
SSBP4-211ENST00000601614 TMEM175Q9BSA9 504 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 NIFKQ9BYG3 293 aaKnown RBP18.02■□□□□ 0.48
SSBP4-211ENST00000601614 RSAD1Q9HA92 442 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 IFT122Q9HBG6 1241 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 AGPAT5Q9NUQ2 364 aa18.02■□□□□ 0.48
SSBP4-211ENST00000601614 PRG3Q9Y2Y8 225 aaPredicted RBP18.02■□□□□ 0.48
SSBP4-211ENST00000601614 GLUD1P00367 558 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 ADH1AP07327 375 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 ADD1P35611 737 aaKnown RBP18.01■□□□□ 0.47
SSBP4-211ENST00000601614 UBXN11Q5T124 520 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 CYP26C1Q6V0L0 522 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 GET4Q7L5D6 327 aaPredicted RBP18.01■□□□□ 0.47
SSBP4-211ENST00000601614 MRPL10Q7Z7H8 261 aaKnown RBP18.01■□□□□ 0.47
SSBP4-211ENST00000601614 URGCPQ8TCY9 931 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 SLC5A5Q92911 643 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 NXPE3Q969Y0 559 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 NLRP4Q96MN2 994 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 RXFP1Q9HBX9 757 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 SLC2A4RGQ9NR83 387 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 SUCLA2Q9P2R7 463 aaPredicted RBP18.01■□□□□ 0.47
SSBP4-211ENST00000601614 NUMBLQ9Y6R0 609 aa18.01■□□□□ 0.47
SSBP4-211ENST00000601614 STARD6P59095 220 aa18■□□□□ 0.47
SSBP4-211ENST00000601614 COLGALT2Q8IYK4 626 aa18■□□□□ 0.47
SSBP4-211ENST00000601614 PGBD4Q96DM1 585 aa18■□□□□ 0.47
SSBP4-211ENST00000601614 NT5C3AQ9H0P0 336 aa18■□□□□ 0.47
SSBP4-211ENST00000601614 MINDY3Q9H8M7 445 aa18■□□□□ 0.47
SSBP4-211ENST00000601614 STK39Q9UEW8 545 aa18■□□□□ 0.47
SSBP4-211ENST00000601614 NOTCH4Q99466 2003 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 GAS7O60861 476 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
SSBP4-211ENST00000601614 MAFO75444 373 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-211ENST00000601614 HOXA11P31270 313 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-211ENST00000601614 SFNP31947 248 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 GLUD2P49448 558 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 JAK3P52333 1124 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 ATXN1P54253 815 aaKnown RBP17.99■□□□□ 0.47
SSBP4-211ENST00000601614 GPC5P78333 572 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 CDC42EP1Q00587 391 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 XKR3Q5GH77 459 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 LRCH2Q5VUJ6 765 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 PALB2Q86YC2 1186 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 FGF14Q92915 247 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 B3GALT6Q96L58 329 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 FAM193BQ96PV7 902 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-211ENST00000601614 RIT2Q99578 217 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 ESYT1Q9BSJ8 1104 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 INO80BQ9C086 356 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-211ENST00000601614 C6orf50Q9HD87 102 aa17.99■□□□□ 0.47
SSBP4-211ENST00000601614 MTF2Q9Y483 593 aaPredicted RBP17.99■□□□□ 0.47
SSBP4-211ENST00000601614 ZFHX4Q86UP3 3567 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 KLF18A0A0U1RQI7 1052 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 PSMD10O75832 226 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 DNM2P50570 870 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 DSG1Q02413 1049 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 ADCK5Q3MIX3 580 aa17.98■□□□□ 0.47
SSBP4-211ENST00000601614 VARS2Q5ST30 1063 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms