RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 DGAT1O75907 488 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 CENPBP07199 599 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 GALTP07902 379 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 AFF1P51825 1210 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 PTENP60484 403 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 CAPSQ13938 189 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 SYCE2Q6PIF2 218 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 IFNLR1Q8IU57 520 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 VPS52Q8N1B4 723 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 PIGOQ8TEQ8 1089 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 IGSF21Q96ID5 467 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 CCDC43Q96MW1 224 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 KIF2CQ99661 725 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 LLPHQ9BRT6 129 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 PHF7Q9BWX1 381 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 ZBP1Q9H171 429 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 S1PR5Q9H228 398 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 RSAD1Q9HA92 442 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 HCFC2Q9Y5Z7 792 aa16.73■□□□□ 0.27
SHKBP1-226ENST00000600791 CNTNAP2Q9UHC6 1331 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 A0A087WWV3 80 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 CARNS1A5YM72 827 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 SPATA31C1P0DKV0 1188 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 CA8P35219 290 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 ARL2P36404 184 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 PLA2G5P39877 138 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 SLC11A1P49279 550 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 TFDP1Q14186 410 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 CBX2Q14781 532 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 PCBP1Q15365 356 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 C8orf34Q49A92 452 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 ZNF280BQ86YH2 543 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 URGCPQ8TCY9 931 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 CASP10Q92851 521 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 APOL5Q9BWW9 433 aa16.72■□□□□ 0.27
SHKBP1-226ENST00000600791 TECTAO75443 2155 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 INO80B-WBP1J3KQ70 363 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 USO1O60763 962 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 CLASP2O75122 1294 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 DDHD2O94830 711 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 NCLP19338 710 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 GLRA2P23416 452 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 MBTD1Q05BQ5 628 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 POU5F1BQ06416 359 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 AMHR2Q16671 573 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 DDX53Q86TM3 631 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 SMG8Q8ND04 991 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 AUTS2Q8WXX7 1259 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 CCDC51Q96ER9 411 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 CPB2Q96IY4 423 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 ZSCAN31Q96LW9 406 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 VN1R3Q9BXE9 311 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 EIF2AQ9BY44 585 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 FOXP1Q9H334 677 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 IPPQ9Y573 584 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 IRAK3Q9Y616 596 aa16.71■□□□□ 0.27
SHKBP1-226ENST00000600791 MED24O75448 989 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 CXCL14O95715 111 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 POMCP01189 267 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 OR52Z1P0C646 297 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 CTSAP10619 480 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 XRCC6P12956 609 aaKnown RBP eCLIP16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 HOXB8P17481 243 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 AXLP30530 894 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 ORC2Q13416 577 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 BMS1Q14692 1282 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 ZNF174Q15697 407 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 NOTUMQ6P988 496 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 CATSPER3Q86XQ3 398 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 CNNM3Q8NE01 707 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 FBXO18Q8NFZ0 1043 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 FAM122AQ96E09 287 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 RPGRIP1Q96KN7 1286 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 NFKBIZQ9BYH8 718 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 POLR3FQ9H1D9 316 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 TUFT1Q9NNX1 390 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 GPRC5CQ9NQ84 441 aa16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 ARIH1Q9Y4X5 557 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-226ENST00000600791 WDFY4Q6ZS81 3184 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 B4GALT5O43286 388 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 ITGA4P13612 1032 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 ARF4P18085 180 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 RBM25P49756 843 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 POTEGQ6S5H5 508 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 NOSTRINQ8IVI9 506 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 FAM184AQ8NB25 1140 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 FAM193BQ96PV7 902 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 TMEM175Q9BSA9 504 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 SH2B1Q9NRF2 756 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 KANSL3Q9P2N6 904 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 CDH22Q9UJ99 828 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 HES2Q9Y543 173 aa16.69■□□□□ 0.26
SHKBP1-226ENST00000600791 ZNF318Q5VUA4 2279 aa16.68■□□□□ 0.26
SHKBP1-226ENST00000600791 ARL5CA6NH57 179 aa16.68■□□□□ 0.26
SHKBP1-226ENST00000600791 INPPL1O15357 1258 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms