RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 POU5F1BQ06416 359 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 GRIK4Q16099 956 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 MTHFD1LQ6UB35 978 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 RHPN2Q8IUC4 686 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 TMEM139Q8IV31 216 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 CCDC155Q8N6L0 562 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 LINC01465Q8N7H1 131 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 RDH13Q8NBN7 331 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 ZNF397Q8NF99 534 aaPredicted RBP19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 POMGNT1Q8WZA1 660 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 STYXL1Q9Y6J8 313 aa19.27■□□□□ 0.68
SHKBP1-224ENST00000600718 KIAA0391O15091 583 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 CLCN3P51790 818 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 MCCD1P59942 119 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 ZBED6P86452 979 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 BFSP1Q12934 665 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 SLFN12LQ6IEE8 588 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 RNF149Q8NC42 400 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 NEK11Q8NG66 645 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 OR8K1Q8NGG5 319 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 LENG1Q96BZ8 264 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 MAP7D2Q96T17 732 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 ABHD10Q9NUJ1 306 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 GTPBP10A4D1E9 387 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 ARHGAP6O43182 974 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 FECHP22830 423 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 TSR1Q2NL82 804 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 KAT2BQ92831 832 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 FBXL18Q96ME1 805 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 KIAA1586Q9HCI6 787 aa19.26■□□□□ 0.67
SHKBP1-224ENST00000600718 KPNA6O60684 536 aa19.25■□□□□ 0.67
SHKBP1-224ENST00000600718 NOLC1Q14978 699 aaKnown RBP eCLIP19.25■□□□□ 0.67
SHKBP1-224ENST00000600718 FSCN1Q16658 493 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-224ENST00000600718 CCDC113Q9H0I3 377 aa19.25■□□□□ 0.67
SHKBP1-224ENST00000600718 FAM207AQ9NSI2 230 aaPredicted RBP19.25■□□□□ 0.67
SHKBP1-224ENST00000600718 SRRDQ9UH36 339 aa19.25■□□□□ 0.67
SHKBP1-224ENST00000600718 NRCAMQ92823 1304 aa19.25■□□□□ 0.67
SHKBP1-224ENST00000600718 MYL3P08590 195 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 VAMP7P51809 220 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 CAP1Q01518 475 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 MFSD10Q14728 455 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 KIAA0753Q2KHM9 967 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 MARCH8Q5T0T0 291 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 ZPBP2Q6X784 338 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 GPD1LQ8N335 351 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 ZBTB10Q96DT7 871 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 DNAJC7Q99615 494 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 NFKBIZQ9BYH8 718 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 AGPAT5Q9NUQ2 364 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 ZSWIM8A7E2V4 1837 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 GPR25O00155 361 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 HAS3O00219 553 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 SEPT4O43236 478 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 GNRH1P01148 92 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 PSEN2P49810 448 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 GJA9P57773 515 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 PTENP60484 403 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 ENPEPQ07075 957 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 SNRNP35Q16560 246 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 MAPK6Q16659 721 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 EXOC3L4Q17RC7 722 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 GBP6Q6ZN66 633 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 CD99L2Q8TCZ2 262 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 NLRP4Q96MN2 994 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 CRACR2AQ9BSW2 395 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 KATNAL1Q9BW62 490 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 TARS2Q9BW92 718 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 LSM14BQ9BX40 385 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 MRPL4Q9BYD3 311 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 KCND1Q9NSA2 647 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 SPTLC3Q9NUV7 552 aa19.24■□□□□ 0.67
SHKBP1-224ENST00000600718 GOLGA8IPA6NC78 632 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 GOLGA8JA6NMD2 632 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 MSCO60682 206 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 SMIM10L2AP0DMW4 78 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 SMIM10L2BP0DMW5 78 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 FMO5P49326 533 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 BEX3Q00994 111 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 CACNB2Q08289 660 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 TMTC1Q8IUR5 882 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 C17orf53Q8N3J3 647 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 ZSWIM2Q8NEG5 633 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 SAAL1Q96ER3 474 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 MFSD14AQ96MC6 490 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 PLCB1Q9NQ66 1216 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 SETD4Q9NVD3 440 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 EXTL3O43909 919 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 LDHAP00338 332 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 PRKCBP05771 671 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 GJB1P08034 283 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 NKX3-2P78367 333 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 IRX5P78411 483 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 IFNLR1Q8IU57 520 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 CBWD2Q8IUF1 395 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 TMC2Q8TDI7 906 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 UPF3AQ9H1J1 476 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 FZD8Q9H461 694 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 SPC25Q9HBM1 224 aa19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 ZNHIT6Q9NWK9 470 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-224ENST00000600718 CEP72Q9P209 647 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms