RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 SMC3Q9UQE7 1217 aa17.36■□□□□ 0.37
IRF3-226ENST00000600453 ALDH2P05091 517 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 ITGA4P13612 1032 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 IL9P15248 144 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 CYP11B2P19099 503 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 GJB2P29033 226 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 CAPSQ13938 189 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 GIT2Q14161 759 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 PPP2R5AQ15172 486 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 PADI6Q6TGC4 694 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 DTHD1Q6ZMT9 781 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 ZBTB8OSQ8IWT0 167 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 GJD3Q8N144 294 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 LPPQ93052 612 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 PRIMPOLQ96LW4 560 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 TRIM6Q9C030 488 aaPredicted RBP17.35■□□□□ 0.37
IRF3-226ENST00000600453 CSRNP2Q9H175 543 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 POLR3FQ9H1D9 316 aaPredicted RBP17.35■□□□□ 0.37
IRF3-226ENST00000600453 C2orf40Q9H1Z8 148 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 TBC1D13Q9NVG8 400 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 HCSTQ9UBK5 93 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 ARID2Q68CP9 1835 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 PLXNA4Q9HCM2 1894 aa17.35■□□□□ 0.37
IRF3-226ENST00000600453 A0A087WWV3 80 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 TSPAN1O60635 241 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 ZC3H11AO75152 810 aaKnown RBP eCLIP17.34■□□□□ 0.371e-11■□□□□ 11.2
IRF3-226ENST00000600453 SSTR3P32745 418 aaPredicted RBP17.34■□□□□ 0.37
IRF3-226ENST00000600453 GTF2F1P35269 517 aaKnown RBP eCLIP17.34■□□□□ 0.374e-10■■■■■ 32.8
IRF3-226ENST00000600453 TOB1P50616 345 aaPredicted RBP17.34■□□□□ 0.37
IRF3-226ENST00000600453 MBTD1Q05BQ5 628 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 COASYQ13057 564 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 SMAD4Q13485 552 aaKnown RBP17.34■□□□□ 0.37
IRF3-226ENST00000600453 SMC1AQ14683 1233 aaKnown RBP17.34■□□□□ 0.37
IRF3-226ENST00000600453 DUSP6Q16828 381 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 LONRF3Q496Y0 759 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 UBXN11Q5T124 520 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 KRT79Q5XKE5 535 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 ADGRD2Q7Z7M1 963 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 KCTD17Q8N5Z5 321 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 IGSF22Q8N9C0 903 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 TMEM87AQ8NBN3 555 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 ASAP3Q8TDY4 903 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 POP1Q99575 1024 aaKnown RBP17.34■□□□□ 0.37
IRF3-226ENST00000600453 PRMT7Q9NVM4 692 aaPredicted RBP17.34■□□□□ 0.37
IRF3-226ENST00000600453 DNM3Q9UQ16 869 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 INPP5FQ9Y2H2 1132 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 PCDHB6Q9Y5E3 794 aa17.34■□□□□ 0.37
IRF3-226ENST00000600453 LRRIQ4A6NIV6 560 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 MBTPS2O43462 519 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 EYA4O95677 639 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 DLX2Q07687 328 aaPredicted RBP17.33■□□□□ 0.36
IRF3-226ENST00000600453 SMAD2Q15796 467 aaKnown RBP17.33■□□□□ 0.36
IRF3-226ENST00000600453 LARP1BQ659C4 914 aaKnown RBP17.33■□□□□ 0.36
IRF3-226ENST00000600453 POTEGQ6S5H5 508 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 TMEM184AQ6ZMB5 413 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 AGMOQ6ZNB7 445 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 MAEAQ7L5Y9 396 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 DDX53Q86TM3 631 aaKnown RBP17.33■□□□□ 0.36
IRF3-226ENST00000600453 MRPL43Q8N983 215 aaKnown RBP17.33■□□□□ 0.36
IRF3-226ENST00000600453 IFT74Q96LB3 600 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 TMEM175Q9BSA9 504 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 NRDE2Q9H7Z3 1164 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.33■□□□□ 0.36
IRF3-226ENST00000600453 KIAA1024Q9UPX6 916 aa17.33■□□□□ 0.36
IRF3-226ENST00000600453 SPTBN5Q9NRC6 3674 aaKnown RBP17.32■□□□□ 0.36
IRF3-226ENST00000600453 XIRP2A4UGR9 3374 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 ATG2AQ2TAZ0 1938 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 A0A1B0GUA9 196 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 PER2O15055 1255 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 LINC01565O15544 149 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 NR1I2O75469 434 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 GALTP07902 379 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 ARF4P18085 180 aaPredicted RBP17.32■□□□□ 0.36
IRF3-226ENST00000600453 NBR1Q14596 966 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 FAM187BQ17R55 369 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 PLPP4Q5VZY2 271 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 SLC27A1Q6PCB7 646 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 PPP4R3CPQ6ZMV5 832 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 ADHFE1Q8IWW8 467 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 SNX29Q8TEQ0 813 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 KIFAP3Q92845 792 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 IGSF21Q96ID5 467 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 MSLNLQ96KJ4 702 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 KCNG1Q9UIX4 513 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 FAN1Q9Y2M0 1017 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 GIT1Q9Y2X7 761 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 IPPQ9Y573 584 aa17.32■□□□□ 0.36
IRF3-226ENST00000600453 NT5C1B-RDH14C9J2C7 533 aa17.31■□□□□ 0.36
IRF3-226ENST00000600453 TBX10O75333 385 aa17.31■□□□□ 0.36
IRF3-226ENST00000600453 CXCL14O95715 111 aa17.31■□□□□ 0.36
IRF3-226ENST00000600453 ALADP13716 330 aa17.31■□□□□ 0.36
IRF3-226ENST00000600453 HOXB8P17481 243 aaPredicted RBP17.31■□□□□ 0.36
IRF3-226ENST00000600453 PBX3P40426 434 aa17.31■□□□□ 0.36
IRF3-226ENST00000600453 NAMPTP43490 491 aa17.31■□□□□ 0.36
IRF3-226ENST00000600453 EFNA5P52803 228 aa17.31■□□□□ 0.36
IRF3-226ENST00000600453 MAPK6Q16659 721 aa17.31■□□□□ 0.36
IRF3-226ENST00000600453 AMHR2Q16671 573 aa17.31■□□□□ 0.36
IRF3-226ENST00000600453 ARL6IP4Q66PJ3 421 aaKnown RBP17.31■□□□□ 0.36
IRF3-226ENST00000600453 VPS52Q8N1B4 723 aa17.31■□□□□ 0.36
IRF3-226ENST00000600453 SMG8Q8ND04 991 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 239.1 ms