RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 MTIF2P46199 727 aaKnown RBP10.52□□□□□ -0.72
NFKB1-212ENST00000600343 PFKPQ01813 784 aa10.52□□□□□ -0.72
NFKB1-212ENST00000600343 EIF4A2Q14240 407 aaKnown RBP10.52□□□□□ -0.72
NFKB1-212ENST00000600343 FIGNQ5HY92 759 aa10.52□□□□□ -0.72
NFKB1-212ENST00000600343 BTNL9Q6UXG8 535 aa10.52□□□□□ -0.72
NFKB1-212ENST00000600343 TTC39CQ8N584 583 aa10.52□□□□□ -0.72
NFKB1-212ENST00000600343 DDHD1Q8NEL9 900 aa10.52□□□□□ -0.72
NFKB1-212ENST00000600343 PRICKLE1Q96MT3 831 aaPredicted RBP10.52□□□□□ -0.72
NFKB1-212ENST00000600343 MROH1Q8NDA8 1641 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 ARHGAP10A1A4S6 786 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 XPOTO43592 962 aaKnown RBP10.52□□□□□ -0.73
NFKB1-212ENST00000600343 PDE1CQ14123 709 aaPredicted RBP10.52□□□□□ -0.73
NFKB1-212ENST00000600343 ZNF423Q2M1K9 1284 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 SCYL3Q8IZE3 742 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 RIN3Q8TB24 985 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 ACTRT1Q8TDG2 376 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 MAGEB18Q96M61 343 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 HGH1Q9BTY7 390 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 USP40Q9NVE5 1235 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 STK36Q9NRP7 1315 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 CES2O00748 559 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 HNRNPCL1O60812 293 aaKnown RBP10.52□□□□□ -0.73
NFKB1-212ENST00000600343 TRMUO75648 421 aaKnown RBP10.52□□□□□ -0.73
NFKB1-212ENST00000600343 GH1P01241 217 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 APOEP02649 317 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 CRABP2P29373 138 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 RPL5P46777 297 aaKnown RBP10.52□□□□□ -0.73
NFKB1-212ENST00000600343 PTK7Q13308 1070 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 TAF1BQ53T94 588 aaPredicted RBP10.52□□□□□ -0.73
NFKB1-212ENST00000600343 RRAGAQ7L523 313 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 WAPLQ7Z5K2 1190 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 VPS52Q8N1B4 723 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 U2AF1L4Q8WU68 220 aaKnown RBP10.52□□□□□ -0.73
NFKB1-212ENST00000600343 EEF2KMTQ96G04 330 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 ANKRD36BP1Q96IX9 119 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 NOC4LQ9BVI4 516 aaKnown RBP10.52□□□□□ -0.73
NFKB1-212ENST00000600343 FAM207AQ9NSI2 230 aaPredicted RBP10.52□□□□□ -0.73
NFKB1-212ENST00000600343 NDE1Q9NXR1 346 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 XDHP47989 1333 aa10.52□□□□□ -0.73
NFKB1-212ENST00000600343 EXOC3O60645 756 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 ITGA4P13612 1032 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 PMS1P54277 932 aaKnown RBP10.51□□□□□ -0.73
NFKB1-212ENST00000600343 GRM2Q14416 872 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 NAB2Q15742 525 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 SFR1Q86XK3 245 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 LRRC49Q8IUZ0 686 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 SEC14L1Q92503 715 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 PLGRKTQ9HBL7 147 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 NLRC4Q9NPP4 1024 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 ZFP69BQ9UJL9 534 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 TTC7AQ9ULT0 858 aaPredicted RBP10.51□□□□□ -0.73
NFKB1-212ENST00000600343 DMTF1Q9Y222 760 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 MYH6P13533 1939 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 CCDC22O60826 627 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 BAG2O95816 211 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 LDHCP07864 332 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 CREB1P16220 341 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 KLRC1P26715 233 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 PCSK6P29122 969 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 PLTPP55058 493 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 C16orf72Q14CZ0 275 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 ARL13BQ3SXY8 428 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 SNRNP48Q6IEG0 339 aaKnown RBP10.51□□□□□ -0.73
NFKB1-212ENST00000600343 VSTM1Q6UX27 236 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 RASSF3Q86WH2 238 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.51□□□□□ -0.73
NFKB1-212ENST00000600343 CNOT7Q9UIV1 285 aaKnown RBP10.51□□□□□ -0.73
NFKB1-212ENST00000600343 RBMX2Q9Y388 322 aaKnown RBP10.51□□□□□ -0.73
NFKB1-212ENST00000600343 LRRC53A6NM62 1247 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 FAM47E-STBD1D6RA91 191 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 TGFBIQ15582 683 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 BARGINQ6ZT62 677 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 MORC4Q8TE76 937 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 COG3Q96JB2 828 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 CYTH2Q99418 400 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 CDK19Q9BWU1 502 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 LRRC27Q9C0I9 530 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 SOS2Q07890 1332 aaPredicted RBP10.51□□□□□ -0.73
NFKB1-212ENST00000600343 PNPLA7Q6ZV29 1317 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 PITPNM2Q9BZ72 1349 aa10.51□□□□□ -0.73
NFKB1-212ENST00000600343 TNFRSF10AO00220 468 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 GYG2O15488 501 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 CLPTM1O96005 669 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 RPN1P04843 607 aaKnown RBP10.5□□□□□ -0.73
NFKB1-212ENST00000600343 ANPEPP15144 967 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 BCAP31P51572 246 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 PTPROQ16827 1216 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 RFX8Q6ZV50 586 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 ZNF804AQ7Z570 1209 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 MICU3Q86XE3 530 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 BTBD10Q9BSF8 475 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 SLC26A6Q9BXS9 759 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 KCNJ14Q9UNX9 436 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 GTPBP6O43824 516 aaPredicted RBP10.5□□□□□ -0.73
NFKB1-212ENST00000600343 DNAJC6O75061 913 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 OCM2P0CE71 109 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 OCMP0CE72 109 aaPredicted RBP10.5□□□□□ -0.73
NFKB1-212ENST00000600343 EEF2P13639 858 aaKnown RBP10.5□□□□□ -0.73
NFKB1-212ENST00000600343 ASPHQ12797 758 aa10.5□□□□□ -0.73
NFKB1-212ENST00000600343 NR1D2Q14995 579 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms