RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 LPAR1Q92633 364 aa12.48□□□□□ -0.41
ARHGEF1-220ENST00000600274 ATP2C2O75185 946 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 SGPL1O95470 568 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 ADRB2P07550 413 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 MARK3P27448 753 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 PSMC5P62195 406 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 ZNF280CQ8ND82 737 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 FAM76AQ8TAV0 307 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 TRPM4Q8TD43 1214 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 CASKIN2Q8WXE0 1202 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 ARL8AQ96BM9 186 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 TEPSINQ96N21 525 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 KIAA1683Q9H0B3 1180 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 PGRMC1O00264 195 aaKnown RBP12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 TNNI1P19237 187 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 GUCY2CP25092 1073 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 SNRNP35Q16560 246 aaKnown RBP12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 PCNX4Q63HM2 1172 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 CPNE8Q86YQ8 564 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 USP38Q8NB14 1042 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 EXOC4Q96A65 974 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 TRIM51Q9BSJ1 452 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 TBC1D22BQ9NU19 505 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 PCDHGC5Q9Y5F6 944 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 TBC1D12O60347 775 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 CTNND1O60716 968 aaKnown RBP12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 CNGA1P29973 690 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 NPTX2P47972 431 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 CCT5P48643 541 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 ACOT2P49753 483 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 EPHB4P54760 987 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 BACE1P56817 501 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 CNTN2Q02246 1040 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 TMEM132AQ24JP5 1023 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 INTS8Q75QN2 995 aaKnown RBP12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 ANO5Q75V66 913 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 PLEKHO2Q8TD55 490 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 LMBR1Q8WVP7 490 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 TCHPQ9BT92 498 aa12.47□□□□□ -0.41
ARHGEF1-220ENST00000600274 TTI1O43156 1089 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 SART1O43290 800 aaKnown RBP12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 SPOPO43791 374 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 IVLP07476 585 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 LMNB1P20700 586 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 NF2P35240 595 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 MNAT1P51948 309 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 PAK2Q13177 524 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 SLC47A2Q86VL8 602 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 BSNDQ8WZ55 320 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 MED4Q9NPJ6 270 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 PCDHA10Q9Y5I2 948 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 UBIAD1Q9Y5Z9 338 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 DAPK3O43293 454 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 CCND2P30279 289 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 DCAF15Q66K64 600 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 PASD1Q8IV76 773 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 TAS1R2Q8TE23 839 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 UBXN6Q9BZV1 441 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 PTPN22Q9Y2R2 807 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 NR2E1Q9Y466 385 aa12.46□□□□□ -0.41
ARHGEF1-220ENST00000600274 CCDC172P0C7W6 258 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 POLGP54098 1239 aaPredicted RBP12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 FSTL1Q12841 308 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 ODF2Q5BJF6 829 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 RNF187Q5TA31 235 aaPredicted RBP12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 FKBP1CQ5VVH2 108 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 GADL1Q6ZQY3 521 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 NCAPG2Q86XI2 1143 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZC3H3Q8IXZ2 948 aaKnown RBP12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 INPP4AQ96PE3 977 aaPredicted RBP12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZIM3Q96PE6 472 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 PPP1R16BQ96T49 567 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 AGPAT1Q99943 283 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 TMEM117Q9H0C3 514 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 CENPFP49454 3210 aa12.46□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZNF862O60290 1169 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 HOXA7P31268 230 aaPredicted RBP12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 MARCKSL1P49006 195 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZNF131P52739 623 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 CEP85LQ5SZL2 805 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 CCDC60Q8IWA6 550 aaPredicted RBP12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 AENQ8WTP8 325 aaKnown RBP12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 GLG1Q92896 1179 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 BORCS6Q96GS4 357 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 CEP89Q96ST8 783 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 SLC26A4O43511 780 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 MMEP08473 750 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 PRLRP16471 622 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 PTPRAP18433 802 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 LIG4P49917 911 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 JAM2P57087 298 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 PRKCEQ02156 737 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 TMEM132BQ14DG7 1078 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 DPY19L2P1Q6NXN4 242 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 SRLQ86TD4 932 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 TATDN2Q93075 761 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 TBX20Q9UMR3 447 aa12.45□□□□□ -0.42
ARHGEF1-220ENST00000600274 ZNF541Q9H0D2 1346 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms