RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 CSDE1O75534 798 aaKnown RBP19.95■□□□□ 0.78
SSBP4-207ENST00000600244 EFEMP2O95967 443 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 ALDH2P05091 517 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 URODP06132 367 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 SPATA31D3P0C874 917 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 SKIP12755 728 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 TMOD1P28289 359 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 KIF5BP33176 963 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 MAMSTRQ6ZN01 415 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 SPATA31D4Q6ZUB0 917 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 CATIPQ7Z7H3 387 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 CKAP2LQ8IYA6 745 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 RNF168Q8IYW5 571 aaPredicted RBP19.95■□□□□ 0.78
SSBP4-207ENST00000600244 PHKBQ93100 1093 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 TMEM175Q9BSA9 504 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 HERC2P3Q9BVR0 1158 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 CDH7Q9ULB5 785 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 ZMIZ1Q9ULJ6 1067 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 CEP131Q9UPN4 1083 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 FAN1Q9Y2M0 1017 aa19.95■□□□□ 0.78
SSBP4-207ENST00000600244 DOCK6Q96HP0 2047 aa19.94■□□□□ 0.78
SSBP4-207ENST00000600244 NCAM2O15394 837 aa19.94■□□□□ 0.78
SSBP4-207ENST00000600244 KCNA4P22459 653 aa19.94■□□□□ 0.78
SSBP4-207ENST00000600244 PFKPQ01813 784 aa19.94■□□□□ 0.78
SSBP4-207ENST00000600244 MTAPQ13126 283 aa19.94■□□□□ 0.78
SSBP4-207ENST00000600244 LILRA6Q6PI73 481 aa19.94■□□□□ 0.78
SSBP4-207ENST00000600244 SRBD1Q8N5C6 995 aaKnown RBP19.94■□□□□ 0.78
SSBP4-207ENST00000600244 LY9Q9HBG7 655 aa19.94■□□□□ 0.78
SSBP4-207ENST00000600244 FAM217BQ9NTX9 383 aaPredicted RBP19.94■□□□□ 0.78
SSBP4-207ENST00000600244 ERICH2A1L162 156 aa19.93■□□□□ 0.78
SSBP4-207ENST00000600244 SHISA7A6NL88 538 aa19.93■□□□□ 0.78
SSBP4-207ENST00000600244 SOBPA7XYQ1 873 aa19.93■□□□□ 0.78
SSBP4-207ENST00000600244 NRP1O14786 923 aa19.93■□□□□ 0.78
SSBP4-207ENST00000600244 GAS2O43903 313 aaKnown RBP19.93■□□□□ 0.78
SSBP4-207ENST00000600244 FSHRP23945 695 aa19.93■□□□□ 0.78
SSBP4-207ENST00000600244 AFF1P51825 1210 aaKnown RBP19.93■□□□□ 0.78
SSBP4-207ENST00000600244 NRLP54845 237 aa19.93■□□□□ 0.78
SSBP4-207ENST00000600244 TRMT1LQ7Z2T5 733 aaKnown RBP19.93■□□□□ 0.78
SSBP4-207ENST00000600244 LZTS2Q9BRK4 669 aa19.93■□□□□ 0.78
SSBP4-207ENST00000600244 FAM105AQ9NUU6 356 aa19.93■□□□□ 0.78
SSBP4-207ENST00000600244 MTCL1Q9Y4B5 1905 aaKnown RBP19.93■□□□□ 0.78
SSBP4-207ENST00000600244 FOXD2O60548 495 aaPredicted RBP19.92■□□□□ 0.78
SSBP4-207ENST00000600244 LIMK1P53667 647 aa19.92■□□□□ 0.78
SSBP4-207ENST00000600244 TRDNQ13061 729 aa19.92■□□□□ 0.78
SSBP4-207ENST00000600244 TWF2Q6IBS0 349 aaKnown RBP19.92■□□□□ 0.78
SSBP4-207ENST00000600244 MTSS1LQ765P7 747 aa19.92■□□□□ 0.78
SSBP4-207ENST00000600244 ZNF687Q8N1G0 1237 aa19.92■□□□□ 0.78
SSBP4-207ENST00000600244 KDF1Q8NAX2 398 aaPredicted RBP19.92■□□□□ 0.78
SSBP4-207ENST00000600244 IGDCC4Q8TDY8 1250 aa19.92■□□□□ 0.78
SSBP4-207ENST00000600244 MAP4K1Q92918 833 aa19.92■□□□□ 0.78
SSBP4-207ENST00000600244 MARCH5Q9NX47 278 aa19.92■□□□□ 0.78
SSBP4-207ENST00000600244 ZBTB47Q9UFB7 747 aaPredicted RBP19.92■□□□□ 0.78
SSBP4-207ENST00000600244 C1QTNF9BB2RNN3 333 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 TGM5O43548 720 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 PLEKHA8P1O95397 391 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 C1QTNF9P0C862 333 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 DSG1Q02413 1049 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 ADCY1Q08828 1119 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 IL31Q6EBC2 164 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 AGMOQ6ZNB7 445 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 TPRG1Q6ZUI0 275 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 NIPA1Q7RTP0 329 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 PALB2Q86YC2 1186 aa19.91■□□□□ 0.78
SSBP4-207ENST00000600244 CTCFLQ8NI51 663 aaPredicted RBP19.91■□□□□ 0.78
SSBP4-207ENST00000600244 MYH9P35579 1960 aaKnown RBP19.91■□□□□ 0.78
SSBP4-207ENST00000600244 SETXQ7Z333 2677 aaKnown RBP19.9■□□□□ 0.78
SSBP4-207ENST00000600244 ZMYND10O75800 440 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 GLUD2P49448 558 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 PRR23BQ6ZRT6 265 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 PLEKHM2Q8IWE5 1019 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 URGCPQ8TCY9 931 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 NLRP7Q8WX94 980 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 FGF13Q92913 245 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 PGBD1Q96JS3 809 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 SCLT1Q96NL6 688 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 GCOM2Q9BZD3 368 aaPredicted RBP19.9■□□□□ 0.78
SSBP4-207ENST00000600244 OSBPL3Q9H4L5 887 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 CHST7Q9NS84 486 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 DIAPH3Q9NSV4 1193 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 RALGAPA1Q6GYQ0 2036 aa19.9■□□□□ 0.78
SSBP4-207ENST00000600244 IGF2RP11717 2491 aa19.89■□□□□ 0.77
SSBP4-207ENST00000600244 GNAQP50148 359 aa19.89■□□□□ 0.77
SSBP4-207ENST00000600244 RAB27AP51159 221 aa19.89■□□□□ 0.77
SSBP4-207ENST00000600244 SART3Q15020 963 aaKnown RBP19.89■□□□□ 0.77
SSBP4-207ENST00000600244 UNQ6494/PRO21346Q6UXR6 183 aa19.89■□□□□ 0.77
SSBP4-207ENST00000600244 ZNF852Q6ZMS4 543 aa19.89■□□□□ 0.77
SSBP4-207ENST00000600244 GRASPQ7Z6J2 395 aaPredicted RBP19.89■□□□□ 0.77
SSBP4-207ENST00000600244 CMTR1Q8N1G2 835 aaKnown RBP19.89■□□□□ 0.77
SSBP4-207ENST00000600244 PGBD4Q96DM1 585 aa19.89■□□□□ 0.77
SSBP4-207ENST00000600244 CHRDQ9H2X0 955 aa19.89■□□□□ 0.77
SSBP4-207ENST00000600244 KANSL3Q9P2N6 904 aa19.89■□□□□ 0.77
SSBP4-207ENST00000600244 hCG_1642624A0A1W2PR95 340 aa19.88■□□□□ 0.77
SSBP4-207ENST00000600244 HRO43593 1189 aa19.88■□□□□ 0.77
SSBP4-207ENST00000600244 DDAH1O94760 285 aa19.88■□□□□ 0.77
SSBP4-207ENST00000600244 ANTXR2P58335 489 aa19.88■□□□□ 0.77
SSBP4-207ENST00000600244 NTHL1P78549 312 aa19.88■□□□□ 0.77
SSBP4-207ENST00000600244 SIM2Q14190 667 aaPredicted RBP19.88■□□□□ 0.77
SSBP4-207ENST00000600244 ZNF746Q6NUN9 644 aaPredicted RBP19.88■□□□□ 0.77
SSBP4-207ENST00000600244 MRPL10Q7Z7H8 261 aaKnown RBP19.88■□□□□ 0.77
SSBP4-207ENST00000600244 ZNF654Q8IZM8 581 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms