RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 TMEM87AQ8NBN3 555 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 SPPL3Q8TCT6 385 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 ASAP3Q8TDY4 903 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 POF1BQ8WVV4 589 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 CALML4Q96GE6 196 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 SPG21Q9NZD8 308 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 INPP5FQ9Y2H2 1132 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 KIAA1671Q9BY89 1806 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 PHLPP2Q6ZVD8 1323 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 SLC26A4O43511 780 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 NR1I2O75469 434 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 CSPG5O95196 566 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 EYA4O95677 639 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 SSBP05455 408 aaKnown RBP eCLIP15.64■□□□□ 0.09
LIG1-218ENST00000599322 ITGB1P05556 798 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 NAMPTP43490 491 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 EFNA5P52803 228 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 ZNF598Q86UK7 904 aaKnown RBP15.64■□□□□ 0.09
LIG1-218ENST00000599322 TMEM169Q96HH4 297 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 PRIMPOLQ96LW4 560 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 DRC1Q96MC2 740 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 ADPGKQ9BRR6 497 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 TIPINQ9BVW5 301 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 CSRNP2Q9H175 543 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 UBE2ZQ9H832 354 aaPredicted RBP15.64■□□□□ 0.09
LIG1-218ENST00000599322 MINDY3Q9H8M7 445 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 RSAD1Q9HA92 442 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 TLR9Q9NR96 1032 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 LZTS1Q9Y250 596 aa15.64■□□□□ 0.09
LIG1-218ENST00000599322 TSPAN1O60635 241 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 LINC00271P0C7V0 271 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 SRGAP2BP0DMP2 458 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 KCNA5P22460 613 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 PLCB3Q01970 1234 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 MBTD1Q05BQ5 628 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 LONRF3Q496Y0 759 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 CLLU1OSQ5K130 101 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 MRPL10Q7Z7H8 261 aaKnown RBP15.63■□□□□ 0.09
LIG1-218ENST00000599322 MRPS27Q92552 414 aaKnown RBP15.63■□□□□ 0.09
LIG1-218ENST00000599322 KHSRPQ92945 711 aaKnown RBP eCLIP15.63■□□□□ 0.09
LIG1-218ENST00000599322 LPPQ93052 612 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 PABPC5Q96DU9 382 aaKnown RBP15.63■□□□□ 0.09
LIG1-218ENST00000599322 ZSCAN16Q9H4T2 348 aaPredicted RBP15.63■□□□□ 0.09
LIG1-218ENST00000599322 IGFLR1Q9H665 355 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 EPHX3Q9H6B9 360 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 CWH43Q9H720 699 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 NGRNQ9NPE2 291 aaKnown RBP15.63■□□□□ 0.09
LIG1-218ENST00000599322 GPRC5CQ9NQ84 441 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 ENTPD7Q9NQZ7 604 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 CLDND1Q9NY35 253 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 STK39Q9UEW8 545 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 MYO7AQ13402 2215 aa15.63■□□□□ 0.09
LIG1-218ENST00000599322 E9PMD0 336 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 N4BP3O15049 544 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 ZC3H11AO75152 810 aaKnown RBP eCLIP15.62■□□□□ 0.092e-8■■■■□ 25.1
LIG1-218ENST00000599322 LIG1P18858 919 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 NCLP19338 710 aaKnown RBP15.62■□□□□ 0.09
LIG1-218ENST00000599322 SYT1P21579 422 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 CA8P35219 290 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 LONP1P36776 959 aaKnown RBP15.62■□□□□ 0.09
LIG1-218ENST00000599322 TXLNAP40222 546 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 PRPF4BQ13523 1007 aaKnown RBP15.62■□□□□ 0.09
LIG1-218ENST00000599322 SLC27A1Q6PCB7 646 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 TMC7Q7Z402 723 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 CABP7Q86V35 215 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 SNX21Q969T3 373 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 CPB2Q96IY4 423 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 GBP3Q9H0R5 595 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 TLE6Q9H808 572 aa15.62■□□□□ 0.09
LIG1-218ENST00000599322 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.61■□□□□ 0.09
LIG1-218ENST00000599322 CCDC169A6NNP5 214 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 PP2D1A8MPX8 630 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 K7ERI5 159 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 OFD1O75665 1012 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 ALDH2P05091 517 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 ATF7P17544 494 aaPredicted RBP15.61■□□□□ 0.09
LIG1-218ENST00000599322 ARF4P18085 180 aaPredicted RBP15.61■□□□□ 0.09
LIG1-218ENST00000599322 CDC25AP30304 524 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 HOXA11P31270 313 aaPredicted RBP15.61■□□□□ 0.09
LIG1-218ENST00000599322 SMTNP53814 917 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 BCAR1P56945 870 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 DMP1Q13316 513 aaPredicted RBP15.61■□□□□ 0.09
LIG1-218ENST00000599322 SF3A1Q15459 793 aaKnown RBP15.61■□□□□ 0.09
LIG1-218ENST00000599322 CDCA3Q99618 268 aaPredicted RBP15.61■□□□□ 0.09
LIG1-218ENST00000599322 C1QTNF1Q9BXJ1 281 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 C17orf75Q9HAS0 396 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 CD320Q9NPF0 282 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 RNF19AQ9NV58 838 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 KCND2Q9NZV8 630 aa15.61■□□□□ 0.09
LIG1-218ENST00000599322 RBM19Q9Y4C8 960 aaKnown RBP15.61■□□□□ 0.09
LIG1-218ENST00000599322 ARID2Q68CP9 1835 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 STX6O43752 255 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 NPTXRO95502 500 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 PRKCBP05771 671 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 NDUFV1P49821 464 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 IL17AQ16552 155 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 ECM1Q16610 540 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 FAM187BQ17R55 369 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 LEXMQ3ZCV2 418 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms