RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 KSR1Q8IVT5 923 aa19.01■□□□□ 0.63
PNKP-210ENST00000597965 C4orf19Q8IY42 314 aa19.01■□□□□ 0.63
PNKP-210ENST00000597965 SLC22A17Q8WUG5 538 aa19.01■□□□□ 0.63
PNKP-210ENST00000597965 PHOX2BQ99453 314 aa19.01■□□□□ 0.63
PNKP-210ENST00000597965 DHX33Q9H6R0 707 aaKnown RBP19.01■□□□□ 0.63
PNKP-210ENST00000597965 KCNMB3Q9NPA1 279 aa19.01■□□□□ 0.63
PNKP-210ENST00000597965 FAN1Q9Y2M0 1017 aa19.01■□□□□ 0.63
PNKP-210ENST00000597965 CACNA1HO95180 2353 aa19.01■□□□□ 0.63
PNKP-210ENST00000597965 NR1I2O75469 434 aa19■□□□□ 0.63
PNKP-210ENST00000597965 ERLIN2O94905 339 aa19■□□□□ 0.63
PNKP-210ENST00000597965 BAG4O95429 457 aaKnown RBP19■□□□□ 0.63
PNKP-210ENST00000597965 BRD1O95696 1058 aa19■□□□□ 0.63
PNKP-210ENST00000597965 SRGAP2CP0DJJ0 459 aa19■□□□□ 0.63
PNKP-210ENST00000597965 EPCAMP16422 314 aa19■□□□□ 0.63
PNKP-210ENST00000597965 KLRC2P26717 231 aa19■□□□□ 0.63
PNKP-210ENST00000597965 AXLP30530 894 aa19■□□□□ 0.63
PNKP-210ENST00000597965 PTPN14Q15678 1187 aa19■□□□□ 0.63
PNKP-210ENST00000597965 LONRF3Q496Y0 759 aa19■□□□□ 0.63
PNKP-210ENST00000597965 PLA2G4FQ68DD2 849 aa19■□□□□ 0.63
PNKP-210ENST00000597965 C15orf39Q6ZRI6 1047 aa19■□□□□ 0.63
PNKP-210ENST00000597965 MRPL10Q7Z7H8 261 aaKnown RBP19■□□□□ 0.63
PNKP-210ENST00000597965 TMEM173Q86WV6 379 aaPredicted RBP19■□□□□ 0.63
PNKP-210ENST00000597965 SLFN12Q8IYM2 578 aa19■□□□□ 0.63
PNKP-210ENST00000597965 PRPF31Q8WWY3 499 aaKnown RBP19■□□□□ 0.63
PNKP-210ENST00000597965 LIMD1Q9UGP4 676 aa19■□□□□ 0.63
PNKP-210ENST00000597965 SLC37A4O43826 429 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 CCNT1O60563 726 aaKnown RBP18.99■□□□□ 0.63
PNKP-210ENST00000597965 GFRA3O60609 400 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 YWHABP31946 246 aaKnown RBP18.99■□□□□ 0.63
PNKP-210ENST00000597965 SLC11A1P49279 550 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 MXD4Q14582 209 aaPredicted RBP18.99■□□□□ 0.63
PNKP-210ENST00000597965 EPHA7Q15375 998 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 CYP26C1Q6V0L0 522 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 GPR149Q86SP6 731 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 HACE1Q8IYU2 909 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 C12orf76Q8N812 135 aaPredicted RBP18.99■□□□□ 0.63
PNKP-210ENST00000597965 AUTS2Q8WXX7 1259 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 CCDC51Q96ER9 411 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 PHF20Q9BVI0 1012 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 ZSWIM4Q9H7M6 989 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 DNAJB4Q9UDY4 337 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 VAV3Q9UKW4 847 aa18.99■□□□□ 0.63
PNKP-210ENST00000597965 URODP06132 367 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 NCLP19338 710 aaKnown RBP18.98■□□□□ 0.63
PNKP-210ENST00000597965 CLCN4P51793 760 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 CLCN5P51795 746 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 LAMTOR4Q0VGL1 99 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 STK3Q13188 491 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 TFDP1Q14186 410 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 NPY5RQ15761 445 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 ASTLQ6HA08 431 aaPredicted RBP18.98■□□□□ 0.63
PNKP-210ENST00000597965 TMC5Q6UXY8 1006 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 AGMOQ6ZNB7 445 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 WASF1Q92558 559 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 KLHL5Q96PQ7 755 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 LXNQ9BS40 222 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 PDRG1Q9NUG6 133 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 CDH22Q9UJ99 828 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 STK36Q9NRP7 1315 aa18.98■□□□□ 0.63
PNKP-210ENST00000597965 MEIS3P2A8K0S8 358 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 H0Y858 1186 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 EML1O00423 815 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 SOD2P04179 222 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 ADH1AP07327 375 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 WEE2P0C1S8 567 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 NPEPPSP55786 919 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 NOTUMQ6P988 496 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 FERMT3Q86UX7 667 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 ZNF280BQ86YH2 543 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 RNF149Q8NC42 400 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 STAMQ92783 540 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 TMEM143Q96AN5 459 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 MTRQ99707 1265 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 BRMS1Q9HCU9 246 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 IGSF9Q9P2J2 1179 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 USP34Q70CQ2 3546 aa18.97■□□□□ 0.63
PNKP-210ENST00000597965 PROB1E7EW31 1015 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 NRP1O14786 923 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 C1RP00736 705 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 PDGFBP01127 241 aaPredicted RBP18.96■□□□□ 0.63
PNKP-210ENST00000597965 ASGR2P07307 311 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 CNPP09543 421 aaKnown RBP18.96■□□□□ 0.63
PNKP-210ENST00000597965 ITGA4P13612 1032 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 HOXA11P31270 313 aaPredicted RBP18.96■□□□□ 0.63
PNKP-210ENST00000597965 POU5F1BQ06416 359 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 TDGQ13569 410 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 EMC2Q15006 297 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 XKR9Q5GH70 373 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 BCL7CQ8WUZ0 217 aaPredicted RBP18.96■□□□□ 0.63
PNKP-210ENST00000597965 RHOBTB2Q9BYZ6 727 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 KCNJ14Q9UNX9 436 aa18.96■□□□□ 0.63
PNKP-210ENST00000597965 DDHD2O94830 711 aa18.95■□□□□ 0.62
PNKP-210ENST00000597965 POMCP01189 267 aa18.95■□□□□ 0.62
PNKP-210ENST00000597965 PIK3AP1Q6ZUJ8 805 aa18.95■□□□□ 0.62
PNKP-210ENST00000597965 CMASQ8NFW8 434 aaPredicted RBP18.95■□□□□ 0.62
PNKP-210ENST00000597965 CCDC43Q96MW1 224 aaKnown RBP18.95■□□□□ 0.62
PNKP-210ENST00000597965 AIFM3Q96NN9 605 aa18.95■□□□□ 0.62
PNKP-210ENST00000597965 RPS6KC1Q96S38 1066 aa18.95■□□□□ 0.62
PNKP-210ENST00000597965 TRIM6Q9C030 488 aaPredicted RBP18.95■□□□□ 0.62
PNKP-210ENST00000597965 FAM86C1Q9NVL1 165 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms