RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, humanhuman

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-210ENST00000597641 PHF20Q9BVI0 1012 aa16.97■□□□□ 0.31
PRKD2-210ENST00000597641 C22orf23Q9BZE7 217 aa16.97■□□□□ 0.31
PRKD2-210ENST00000597641 RNF39Q9H2S5 420 aa16.97■□□□□ 0.31
PRKD2-210ENST00000597641 EP300Q09472 2414 aaPredicted RBP16.97■□□□□ 0.31
PRKD2-210ENST00000597641 ZNF292O60281 2723 aa16.97■□□□□ 0.31
PRKD2-210ENST00000597641 REC8O95072 547 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 CTDNEP1O95476 244 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 POMCP01189 267 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 CNPP09543 421 aaKnown RBP16.96■□□□□ 0.31
PRKD2-210ENST00000597641 MTHFRP42898 656 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 CDC42EP1Q00587 391 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 SPIRE1Q08AE8 756 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 LAMTOR4Q0VGL1 99 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 SMG8Q8ND04 991 aaKnown RBP16.96■□□□□ 0.31
PRKD2-210ENST00000597641 CEP170P1Q96L14 293 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 KLHL5Q96PQ7 755 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 XPNPEP1Q9NQW7 623 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 MARCH5Q9NX47 278 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 MIOSQ9NXC5 875 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 CYP46A1Q9Y6A2 500 aa16.96■□□□□ 0.31
PRKD2-210ENST00000597641 DMXL1Q9Y485 3027 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 WNT7AO00755 349 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 CPLX1O14810 134 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 MYBP10242 640 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 CLCN4P51793 760 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 RNASELQ05823 741 aaKnown RBP16.95■□□□□ 0.3
PRKD2-210ENST00000597641 MTMR3Q13615 1198 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 CTTNQ14247 550 aaKnown RBP16.95■□□□□ 0.3
PRKD2-210ENST00000597641 KRT25Q7Z3Z0 450 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 ZDHHC14Q8IZN3 488 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 DYDC2Q96IM9 177 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 PRRX2Q99811 253 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 LXNQ9BS40 222 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 EIF2AQ9BY44 585 aaKnown RBP16.95■□□□□ 0.3
PRKD2-210ENST00000597641 TM6SF1Q9BZW5 370 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 INO80BQ9C086 356 aaPredicted RBP16.95■□□□□ 0.3
PRKD2-210ENST00000597641 RSAD1Q9HA92 442 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 DZANK1Q9NVP4 752 aa16.95■□□□□ 0.3
PRKD2-210ENST00000597641 DBR1Q9UK59 544 aaKnown RBP16.95■□□□□ 0.3
PRKD2-210ENST00000597641 CACNA1IQ9P0X4 2223 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 VWA8A3KMH1 1905 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 A0A087WWV3 80 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 NRP1O14786 923 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 N4BP1O75113 896 aaKnown RBP16.94■□□□□ 0.3
PRKD2-210ENST00000597641 EFEMP2O95967 443 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 P4HBP07237 508 aaKnown RBP16.94■□□□□ 0.3
PRKD2-210ENST00000597641 SKIP12755 728 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 RAB27AP51159 221 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 ATAT1Q5SQI0 421 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 GALNT17Q6IS24 598 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 PIK3AP1Q6ZUJ8 805 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 NEK8Q86SG6 692 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 GPR149Q86SP6 731 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 UBALD2Q8IYN6 164 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 TDRD5Q8NAT2 981 aaKnown RBP16.94■□□□□ 0.3
PRKD2-210ENST00000597641 ATOH1Q92858 354 aaPredicted RBP16.94■□□□□ 0.3
PRKD2-210ENST00000597641 SLKQ9H2G2 1235 aaPredicted RBP16.94■□□□□ 0.3
PRKD2-210ENST00000597641 TPCN1Q9ULQ1 816 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 HES2Q9Y543 173 aa16.94■□□□□ 0.3
PRKD2-210ENST00000597641 GALR2O43603 387 aaPredicted RBP16.93■□□□□ 0.3
PRKD2-210ENST00000597641 CCNT1O60563 726 aaKnown RBP16.93■□□□□ 0.3
PRKD2-210ENST00000597641 GFRA3O60609 400 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 YWHABP31946 246 aaKnown RBP16.93■□□□□ 0.3
PRKD2-210ENST00000597641 CYP4A11Q02928 519 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 NR5A1Q13285 461 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 EMC2Q15006 297 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 EPHA7Q15375 998 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 CWF19L1Q69YN2 538 aaKnown RBP16.93■□□□□ 0.3
PRKD2-210ENST00000597641 PPP4R3AQ6IN85 833 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 POTEGQ6S5H5 508 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 SRGAP1Q7Z6B7 1085 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 FERMT3Q86UX7 667 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 CABP7Q86V35 215 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 C4orf19Q8IY42 314 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 COLGALT2Q8IYK4 626 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 RNF149Q8NC42 400 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 PSPC1Q8WXF1 523 aaKnown RBP16.93■□□□□ 0.3
PRKD2-210ENST00000597641 CPB2Q96IY4 423 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 FAM20AQ96MK3 541 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 PDRG1Q9NUG6 133 aa16.93■□□□□ 0.3
PRKD2-210ENST00000597641 PRG3Q9Y2Y8 225 aaPredicted RBP16.93■□□□□ 0.3
PRKD2-210ENST00000597641 NOTCH4Q99466 2003 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 CCDC194A0A1B0GVG4 234 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 C2CD2LO14523 706 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 PI15O43692 258 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 TSPAN1O60635 241 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 FDPSP14324 419 aaKnown RBP16.92■□□□□ 0.3
PRKD2-210ENST00000597641 NPR3P17342 541 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 NCLP19338 710 aaKnown RBP16.92■□□□□ 0.3
PRKD2-210ENST00000597641 NCAPH2Q6IBW4 605 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 ASCL5Q7RTU5 278 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 RNF168Q8IYW5 571 aaPredicted RBP16.92■□□□□ 0.3
PRKD2-210ENST00000597641 ASAP3Q8TDY4 903 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 SLC7A3Q8WY07 619 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 TNFRSF25Q93038 417 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 PGBD4Q96DM1 585 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 ZFP42Q96MM3 310 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 GAD1Q99259 594 aa16.92■□□□□ 0.3
PRKD2-210ENST00000597641 JPH2Q9BR39 696 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms