RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 AGMOQ6ZNB7 445 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 OTUD6AQ7L8S5 288 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 NEK8Q86SG6 692 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 FAM177A1Q8N128 213 aaPredicted RBP11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 ZNF579Q8NAF0 562 aaKnown RBP11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 SLC22A17Q8WUG5 538 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 BCL7CQ8WUZ0 217 aaPredicted RBP11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 PRPF31Q8WWY3 499 aaKnown RBP11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 PSPC1Q8WXF1 523 aaKnown RBP11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 TMEM143Q96AN5 459 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 FAM20AQ96MK3 541 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 KLHL5Q96PQ7 755 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 EMILIN2Q9BXX0 1053 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 SMOC2Q9H3U7 446 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 RSAD1Q9HA92 442 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 PDRG1Q9NUG6 133 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 AGPAT5Q9NUQ2 364 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 KANSL3Q9P2N6 904 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 PTPRZ1P23471 2315 aaPredicted RBP11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 CACNA1HO95180 2353 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 ST18O60284 1047 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 GFRA3O60609 400 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 CDKL5O76039 1030 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 POMCP01189 267 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 RFC5P40937 340 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 NUBP1P53384 320 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 LAMTOR4Q0VGL1 99 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 EPHA7Q15375 998 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 PTPN14Q15678 1187 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 XKR9Q5GH70 373 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 NCAPH2Q6IBW4 605 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 PIK3AP1Q6ZUJ8 805 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 ZDHHC14Q8IZN3 488 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 TCP11Q8WWU5 503 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 ACSF2Q96CM8 615 aaPredicted RBP11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 TMEM175Q9BSA9 504 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 PHF20Q9BVI0 1012 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 TM6SF1Q9BZW5 370 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 MFSD1Q9H3U5 465 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 DHX33Q9H6R0 707 aaKnown RBP11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 MINDY3Q9H8M7 445 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 SFXN1Q9H9B4 322 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 KCNMB3Q9NPA1 279 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 MRPL17Q9NRX2 175 aaKnown RBP11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 STK39Q9UEW8 545 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 USTQ9Y2C2 406 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 CNTNAP2Q9UHC6 1331 aa11.8□□□□□ -0.52
CHMP2A-202ENST00000596708 C2CD2LO14523 706 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 NRP1O14786 923 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 ASAP2O43150 1006 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 EPB41L2O43491 1005 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 GALR2O43603 387 aaPredicted RBP11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 B4GALT3O60512 393 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 ERLIN2O94905 339 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 BAG4O95429 457 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 ITGA4P13612 1032 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 GCFC2P16383 781 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 YWHABP31946 246 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 AFF1P51825 1210 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 SCRN1Q12765 414 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 CTTNQ14247 550 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 PPP4R3AQ6IN85 833 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 CCDC149Q6ZUS6 474 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 MRPL10Q7Z7H8 261 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 FERMT3Q86UX7 667 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 C4orf19Q8IY42 314 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 RNF149Q8NC42 400 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 CNNM3Q8NE01 707 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 DYDC2Q96IM9 177 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 MTRQ99707 1265 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 NAP1L4Q99733 375 aaKnown RBP11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 LXNQ9BS40 222 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 VN1R3Q9BXE9 311 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 RGL1Q9NZL6 768 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 WRAP73Q9P2S5 460 aaPredicted RBP11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 PPME1Q9Y570 386 aa11.79□□□□□ -0.52
CHMP2A-202ENST00000596708 TBX3O15119 743 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 GAS2O43903 313 aaKnown RBP11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 DTNBO60941 627 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 URODP06132 367 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 CNPP09543 421 aaKnown RBP11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 NCLP19338 710 aaKnown RBP11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 HOXA11P31270 313 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 OR1G1P47890 313 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 CLCN4P51793 760 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 AK2P54819 239 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 CYP4A11Q02928 519 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 NCBP1Q09161 790 aaKnown RBP11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 EMC2Q15006 297 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 UBXN11Q5T124 520 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 OTOP3Q7RTS5 596 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 GPR149Q86SP6 731 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 TPH2Q8IWU9 490 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 TMEM105Q8N8V8 129 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 FLCNQ8NFG4 579 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 FEZF2Q8TBJ5 459 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 HAS1Q92839 578 aa11.78□□□□□ -0.52
CHMP2A-202ENST00000596708 ZSWIM4Q9H7M6 989 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms