RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 FERMT3Q86UX7 667 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 ZNF668Q96K58 619 aaPredicted RBP17.78■□□□□ 0.44
USHBP1-205ENST00000595993 RIPOR3Q96MK2 946 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 APOL5Q9BWW9 433 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 ZBP1Q9H171 429 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.78■□□□□ 0.44
USHBP1-205ENST00000595993 PLXNA3P51805 1871 aa17.78■□□□□ 0.44
USHBP1-205ENST00000595993 MYH15Q9Y2K3 1946 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 CARNS1A5YM72 827 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 PDCP20941 246 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 POLGP54098 1239 aaPredicted RBP17.77■□□□□ 0.44
USHBP1-205ENST00000595993 RILPL1Q5EBL4 403 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 CES5AQ6NT32 575 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 TMEM173Q86WV6 379 aaPredicted RBP17.77■□□□□ 0.44
USHBP1-205ENST00000595993 UBALD2Q8IYN6 164 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 RNF169Q8NCN4 708 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 KREMEN2Q8NCW0 462 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 NLRP7Q8WX94 980 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 DYDC2Q96IM9 177 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 IRF2BPLQ9H1B7 796 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 RGL1Q9NZL6 768 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 SORCS3Q9UPU3 1222 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 MTMR6Q9Y217 621 aa17.77■□□□□ 0.44
USHBP1-205ENST00000595993 C2CD4DB7Z1M9 353 aa17.76■□□□□ 0.43
USHBP1-205ENST00000595993 PDGFBP01127 241 aaPredicted RBP17.76■□□□□ 0.43
USHBP1-205ENST00000595993 MTHFRP42898 656 aa17.76■□□□□ 0.43
USHBP1-205ENST00000595993 QARSP47897 775 aaKnown RBP17.76■□□□□ 0.43
USHBP1-205ENST00000595993 ALDH7A1P49419 539 aaKnown RBP17.76■□□□□ 0.43
USHBP1-205ENST00000595993 PSMC5P62195 406 aa17.76■□□□□ 0.43
USHBP1-205ENST00000595993 CYP4A11Q02928 519 aa17.76■□□□□ 0.43
USHBP1-205ENST00000595993 RESTQ13127 1097 aa17.76■□□□□ 0.43
USHBP1-205ENST00000595993 PTGDRQ13258 359 aa17.76■□□□□ 0.43
USHBP1-205ENST00000595993 CTTNQ14247 550 aaKnown RBP17.76■□□□□ 0.43
USHBP1-205ENST00000595993 XKR3Q5GH77 459 aa17.76■□□□□ 0.43
USHBP1-205ENST00000595993 KIAA1841Q6NSI8 718 aa17.76■□□□□ 0.43
USHBP1-205ENST00000595993 ZNF410Q86VK4 478 aa17.76■□□□□ 0.43
USHBP1-205ENST00000595993 EIF2AK1Q9BQI3 630 aaKnown RBP17.76■□□□□ 0.43
USHBP1-205ENST00000595993 SH2D3AQ9BRG2 576 aa17.76■□□□□ 0.43
USHBP1-205ENST00000595993 GCOM2Q9BZD3 368 aaPredicted RBP17.76■□□□□ 0.43
USHBP1-205ENST00000595993 SEPT9Q9UHD8 586 aaPredicted RBP17.76■□□□□ 0.43
USHBP1-205ENST00000595993 NT5C1B-RDH14C9J2C7 533 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 ZNF623O75123 536 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 CSDE1O75534 798 aaKnown RBP17.75■□□□□ 0.43
USHBP1-205ENST00000595993 BRD1O95696 1058 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 P4HBP07237 508 aaKnown RBP17.75■□□□□ 0.43
USHBP1-205ENST00000595993 CTSAP10619 480 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 MTMR3Q13615 1198 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 PLA2G4FQ68DD2 849 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 ANO5Q75V66 913 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 DDX53Q86TM3 631 aaKnown RBP17.75■□□□□ 0.43
USHBP1-205ENST00000595993 ZDHHC14Q8IZN3 488 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 SPRYD3Q8NCJ5 442 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 SLC22A17Q8WUG5 538 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 TMEM169Q96HH4 297 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 IGSF21Q96ID5 467 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 LXNQ9BS40 222 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 DZANK1Q9NVP4 752 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 USTQ9Y2C2 406 aa17.75■□□□□ 0.43
USHBP1-205ENST00000595993 WDR87Q6ZQQ6 2873 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 A0A087WZ62 844 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 PROB1E7EW31 1015 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 MAFO75444 373 aaPredicted RBP17.74■□□□□ 0.43
USHBP1-205ENST00000595993 CXCL14O95715 111 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 SKIP12755 728 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 SFPQP23246 707 aaKnown RBP eCLIP17.74■□□□□ 0.43
USHBP1-205ENST00000595993 SP100P23497 879 aaPredicted RBP17.74■□□□□ 0.43
USHBP1-205ENST00000595993 GIT2Q14161 759 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 IL17AQ16552 155 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 MTERF2Q49AM1 385 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 BRAPQ7Z569 592 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 VPS52Q8N1B4 723 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 BCL7CQ8WUZ0 217 aaPredicted RBP17.74■□□□□ 0.43
USHBP1-205ENST00000595993 SCLT1Q96NL6 688 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 HSD17B14Q9BPX1 270 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 FDXACB1Q9BRP7 624 aaPredicted RBP17.74■□□□□ 0.43
USHBP1-205ENST00000595993 NRDE2Q9H7Z3 1164 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 TBC1D13Q9NVG8 400 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 MYO10Q9HD67 2058 aa17.74■□□□□ 0.43
USHBP1-205ENST00000595993 MEIS3P2A8K0S8 358 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 DDX11L8A8MPP1 907 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 GALR2O43603 387 aaPredicted RBP17.73■□□□□ 0.43
USHBP1-205ENST00000595993 STX6O43752 255 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 SLITRK3O94933 977 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 GALTP07902 379 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 FXR2P51116 673 aaKnown RBP eCLIP17.73■□□□□ 0.43
USHBP1-205ENST00000595993 ATP2C1P98194 919 aaPredicted RBP17.73■□□□□ 0.43
USHBP1-205ENST00000595993 FAM173BQ6P4H8 233 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 ZBTB33Q86T24 672 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 C4orf19Q8IY42 314 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 ZNF579Q8NAF0 562 aaKnown RBP17.73■□□□□ 0.43
USHBP1-205ENST00000595993 VN1R3Q9BXE9 311 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 INO80BQ9C086 356 aaPredicted RBP17.73■□□□□ 0.43
USHBP1-205ENST00000595993 TSHZ2Q9NRE2 1034 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 FAM105AQ9NUU6 356 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 FAM86C1Q9NVL1 165 aa17.73■□□□□ 0.43
USHBP1-205ENST00000595993 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.72■□□□□ 0.43
USHBP1-205ENST00000595993 ZBTB39O15060 712 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 B4GALT3O60512 393 aa17.72■□□□□ 0.43
USHBP1-205ENST00000595993 ZC3H11AO75152 810 aaKnown RBP eCLIP17.72■□□□□ 0.43
USHBP1-205ENST00000595993 OFD1O75665 1012 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms