RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 NAMPTP43490 491 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 ALDH7A1P49419 539 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 BMS1Q14692 1282 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 LRRC55Q6ZSA7 311 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 IFT74Q96LB3 600 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 AK8Q96MA6 479 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 UHRF1Q96T88 793 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 TIPINQ9BVW5 301 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 TRIM6Q9C030 488 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 CSRNP2Q9H175 543 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 BHMT2Q9H2M3 363 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 RSAD1Q9HA92 442 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 PHLPP2Q6ZVD8 1323 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 ZMYM2Q9UBW7 1377 aa19.64■□□□□ 0.73
SHKBP1-204ENST00000594862 VPS37CA5D8V6 355 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 K7ELQ4 463 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 EYA4O95677 639 aa19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 KCNQ1P51787 676 aa19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 RNASELQ05823 741 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 CAMK1Q14012 370 aa19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 DEPTORQ8TB45 409 aa19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 CDK5RAP3Q96JB5 506 aa19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 CDCA3Q99618 268 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 GPRC5CQ9NQ84 441 aa19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 CLDND1Q9NY35 253 aa19.63■□□□□ 0.73
SHKBP1-204ENST00000594862 A0A087WWV3 80 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 ITGA4P13612 1032 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 COL9A1P20849 921 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 DNAJB1P25685 340 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 EFNA5P52803 228 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 HYAL1Q12794 435 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 MAPK6Q16659 721 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 FAM187BQ17R55 369 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 UBXN11Q5T124 520 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 SLC27A1Q6PCB7 646 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 MAEAQ7L5Y9 396 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 MICAL1Q8TDZ2 1067 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 LPPQ93052 612 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 TMEM169Q96HH4 297 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 NGRNQ9NPE2 291 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 TBC1D13Q9NVG8 400 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 KCNG1Q9UIX4 513 aa19.62■□□□□ 0.73
SHKBP1-204ENST00000594862 VWA3AA6NCI4 1184 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 OFD1O75665 1012 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 SRGAP2BP0DMP2 458 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 ARF4P18085 180 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 AMHR2Q16671 573 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 CTC1Q2NKJ3 1217 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 HYIQ5T013 277 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 SLC39A11Q8N1S5 342 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 DRC1Q96MC2 740 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 HCSTQ9UBK5 93 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 INPP5FQ9Y2H2 1132 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 IPPQ9Y573 584 aa19.61■□□□□ 0.73
SHKBP1-204ENST00000594862 A0A1B0GUA9 196 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 FSCN2O14926 492 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 N4BP3O15049 544 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 INPPL1O15357 1258 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 ZC3H11AO75152 810 aaKnown RBP eCLIP19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 BCAR1P56945 870 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 IL17AQ16552 155 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 ECM1Q16610 540 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 AGMOQ6ZNB7 445 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 EP400NLQ6ZTU2 488 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 APBB1IPQ7Z5R6 666 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 EFHBQ8N7U6 833 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 SNX21Q969T3 373 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 FAM193BQ96PV7 902 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 TMEM175Q9BSA9 504 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 FZD8Q9H461 694 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 TLE6Q9H808 572 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 C17orf75Q9HAS0 396 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 ENTPD7Q9NQZ7 604 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 KCND2Q9NZV8 630 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 GTF3C3Q9Y5Q9 886 aa19.6■□□□□ 0.73
SHKBP1-204ENST00000594862 PP2D1A8MPX8 630 aa19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 CSPG5O95196 566 aa19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 PDIA4P13667 645 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 IRS1P35568 1242 aa19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 PRPF4BQ13523 1007 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 TMEM132AQ24JP5 1023 aa19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 PTCRAQ6ISU1 281 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 SMG8Q8ND04 991 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 CPB2Q96IY4 423 aa19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 TCF25Q9BQ70 676 aa19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 ADPGKQ9BRR6 497 aa19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 MMTAG2Q9BU76 263 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 GIT1Q9Y2X7 761 aa19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 BRWD1Q9NSI6 2320 aa19.59■□□□□ 0.73
SHKBP1-204ENST00000594862 E9PMD0 336 aa19.58■□□□□ 0.72
SHKBP1-204ENST00000594862 ACKR2O00590 384 aa19.58■□□□□ 0.72
SHKBP1-204ENST00000594862 PRKCBP05771 671 aa19.58■□□□□ 0.72
SHKBP1-204ENST00000594862 LONP1P36776 959 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-204ENST00000594862 UBA7P41226 1012 aa19.58■□□□□ 0.72
SHKBP1-204ENST00000594862 NRIP1P48552 1158 aa19.58■□□□□ 0.72
SHKBP1-204ENST00000594862 DMP1Q13316 513 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-204ENST00000594862 ADAM15Q13444 863 aa19.58■□□□□ 0.72
SHKBP1-204ENST00000594862 GIT2Q14161 759 aa19.58■□□□□ 0.72
SHKBP1-204ENST00000594862 SMC1AQ14683 1233 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms