RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 RCOR1Q9UKL0 485 aa20.57■□□□□ 0.88
TCF3-216ENST00000592395 KIAA1671Q9BY89 1806 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 ZNF623O75123 536 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 ATF7P17544 494 aaPredicted RBP20.56■□□□□ 0.88
TCF3-216ENST00000592395 NPTX2P47972 431 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 GATMP50440 423 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 PEX3P56589 373 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 NUCB2P80303 420 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 RAD51AP2Q09MP3 1159 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 DHX8Q14562 1220 aaKnown RBP20.56■□□□□ 0.88
TCF3-216ENST00000592395 MAPK6Q16659 721 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 ARSHQ5FYA8 562 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 AXDND1Q5T1B0 1012 aaPredicted RBP20.56■□□□□ 0.88
TCF3-216ENST00000592395 SPRED2Q7Z698 418 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 MYLIPQ8WY64 445 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 ARNTL2Q8WYA1 636 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 GAS2L1Q99501 681 aaPredicted RBP20.56■□□□□ 0.88
TCF3-216ENST00000592395 CCDC113Q9H0I3 377 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 KCNG1Q9UIX4 513 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 ODF2LQ9ULJ1 636 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 PCDHB8Q9UN66 801 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 PCDHB13Q9Y5F0 798 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 COL4A4P53420 1690 aaPredicted RBP20.56■□□□□ 0.88
TCF3-216ENST00000592395 TCHHQ07283 1943 aa20.56■□□□□ 0.88
TCF3-216ENST00000592395 MYO9BQ13459 2157 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 CCDC169A6NNP5 214 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 FGFR1P11362 822 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 ARF4P18085 180 aaPredicted RBP20.55■□□□□ 0.88
TCF3-216ENST00000592395 NCLP19338 710 aaKnown RBP20.55■□□□□ 0.88
TCF3-216ENST00000592395 ME1P48163 572 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 PAN2Q504Q3 1202 aaKnown RBP20.55■□□□□ 0.88
TCF3-216ENST00000592395 NAALADL2Q58DX5 795 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 RNF169Q8NCN4 708 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 CPB2Q96IY4 423 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 C17orf80Q9BSJ5 609 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 KIFC3Q9BVG8 833 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 TMEM117Q9H0C3 514 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 KMT5AQ9NQR1 393 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 RNF19AQ9NV58 838 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 MTUS1Q9ULD2 1270 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 PCDHA7Q9UN72 937 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 STXBP5LQ9Y2K9 1186 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 RWDD3Q9Y3V2 267 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 PCDHB2Q9Y5E7 798 aa20.55■□□□□ 0.88
TCF3-216ENST00000592395 PHLPP2Q6ZVD8 1323 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 CNTNAP2Q9UHC6 1331 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 NPHP3-ACAD11A0A0J9YXS1 232 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 EPOPA6NHQ4 379 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 TBKBP1A7MCY6 615 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 PRKCBP05771 671 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 PLS3P13797 630 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 STAT6P42226 847 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 UBXN11Q5T124 520 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 SHC4Q6S5L8 630 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 ABI1Q8IZP0 508 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 SPIRE2Q8WWL2 714 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 CLP1Q92989 425 aaKnown RBP20.54■□□□□ 0.88
TCF3-216ENST00000592395 REEP2Q9BRK0 252 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 LARSQ9P2J5 1176 aaKnown RBP20.54■□□□□ 0.88
TCF3-216ENST00000592395 ARHGAP28Q9P2N2 729 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 RBM19Q9Y4C8 960 aaKnown RBP20.54■□□□□ 0.88
TCF3-216ENST00000592395 CHD7Q9P2D1 2997 aa20.54■□□□□ 0.88
TCF3-216ENST00000592395 A0A087X0B3 334 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 SFI1A8K8P3 1242 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 ACKR2O00590 384 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 B4GALT5O43286 388 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 KRT18P05783 430 aaKnown RBP20.53■□□□□ 0.88
TCF3-216ENST00000592395 LINC00271P0C7V0 271 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 FOSL2P15408 326 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 PRPF4BQ13523 1007 aaKnown RBP20.53■□□□□ 0.88
TCF3-216ENST00000592395 EPC2Q52LR7 807 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 TMEM192Q8IY95 271 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 CNNM3Q8NE01 707 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 FBXO22Q8NEZ5 403 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 RSPH1Q8WYR4 309 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 PGBD4Q96DM1 585 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 SPATA32Q96LK8 384 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 CASD1Q96PB1 797 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 NTPCRQ9BSD7 190 aaKnown RBP20.53■□□□□ 0.88
TCF3-216ENST00000592395 PANK2Q9BZ23 570 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 TMEM134Q9H6X4 195 aa20.53■□□□□ 0.88
TCF3-216ENST00000592395 MRPL42Q9Y6G3 142 aaKnown RBP20.53■□□□□ 0.88
TCF3-216ENST00000592395 A0A1B0GUA9 196 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 K7ERI5 159 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 FAM13AO94988 1023 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 LIG1P18858 919 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 ANP32AP39687 249 aaKnown RBP20.52■□□□□ 0.88
TCF3-216ENST00000592395 SMTNP53814 917 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 GIT2Q14161 759 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 CLLU1OSQ5K130 101 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 SLC27A1Q6PCB7 646 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 SV2BQ7L1I2 683 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 MRPL10Q7Z7H8 261 aaKnown RBP20.52■□□□□ 0.88
TCF3-216ENST00000592395 PDILTQ8N807 584 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 LEO1Q8WVC0 666 aaPredicted RBP20.52■□□□□ 0.88
TCF3-216ENST00000592395 KIF12Q96FN5 646 aa20.52■□□□□ 0.88
TCF3-216ENST00000592395 SCAND2PQ9GZW5 306 aaPredicted RBP20.52■□□□□ 0.88
TCF3-216ENST00000592395 RFXAPO00287 272 aa20.51■□□□□ 0.87
TCF3-216ENST00000592395 N4BP3O15049 544 aa20.51■□□□□ 0.87
TCF3-216ENST00000592395 SLC16A4O15374 487 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms