RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 PRPF4BQ13523 1007 aaKnown RBP20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 KCNB1Q14721 858 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 TCTN1Q2MV58 587 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 C16orf59Q7L2K0 433 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 CDR2LQ86X02 465 aaPredicted RBP20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 SLC17A8Q8NDX2 589 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 CCDC113Q9H0I3 377 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 RMND1Q9NWS8 449 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 TMEM63CQ9P1W3 806 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 MAN1B1Q9UKM7 699 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 MAPK8IP1Q9UQF2 711 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 PIN4Q9Y237 131 aaKnown RBP20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 TNRC18O15417 2968 aaPredicted RBP20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 MYH11P35749 1972 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 ACKR2O00590 384 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 TSPAN1O60635 241 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 EDN1P05305 212 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 ZSCAN20P17040 1043 aaPredicted RBP20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 MAGEA10P43363 369 aaPredicted RBP20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 OTOP2Q7RTS6 562 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 SMYD4Q8IYR2 804 aaPredicted RBP20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 SPATA20Q8TB22 786 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 BICD1Q96G01 975 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 TMX1Q9H3N1 280 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 GDAQ9Y2T3 454 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 SCN5AQ14524 2016 aa20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 ARF4P18085 180 aaPredicted RBP20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 AMHR2Q16671 573 aa20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 KLHL40Q2TBA0 621 aa20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 SKOR2Q2VWA4 1001 aaPredicted RBP20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 CCDC183Q5T5S1 534 aa20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 NT5DC1Q5TFE4 455 aa20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 ZNF365Q70YC5 407 aa20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 NELFCDQ8IXH7 590 aa20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 KIAA0895Q8NCT3 520 aa20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 TARS2Q9BW92 718 aaKnown RBP20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 IKZF4Q9H2S9 585 aa20.16■□□□□ 0.82
CROCCP3-205ENST00000591316 PHLPP2Q6ZVD8 1323 aa20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 FGBP02675 491 aa20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 HOXA11P31270 313 aaPredicted RBP20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 IKBKEQ14164 716 aa20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 FAM187BQ17R55 369 aa20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 CNKSR3Q6P9H4 555 aa20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 STXBP4Q6ZWJ1 553 aa20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 SYCP3Q8IZU3 236 aa20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 ADAM2Q99965 735 aa20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 STRA6Q9BX79 667 aa20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 MRPL4Q9BYD3 311 aaKnown RBP20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 ST6GALNAC4Q9H4F1 302 aa20.15■□□□□ 0.82
CROCCP3-205ENST00000591316 MGEA5O60502 916 aa20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 PPP1R37O75864 691 aa20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 PCBP1Q15365 356 aaKnown RBP eCLIP20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 L1TD1Q5T7N2 865 aaKnown RBP20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 TWF2Q6IBS0 349 aaKnown RBP20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 RTN4RL1Q86UN2 441 aaPredicted RBP20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 SCFD1Q8WVM8 642 aa20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 APBB2Q92870 758 aa20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 PRIMPOLQ96LW4 560 aa20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 ACCSQ96QU6 501 aa20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 TCHPQ9BT92 498 aa20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 AGPAT5Q9NUQ2 364 aa20.14■□□□□ 0.81
CROCCP3-205ENST00000591316 ENPP3O14638 875 aa20.13■□□□□ 0.81
CROCCP3-205ENST00000591316 PFKMP08237 780 aa20.13■□□□□ 0.81
CROCCP3-205ENST00000591316 ZNF658Q5TYW1 1059 aaPredicted RBP20.13■□□□□ 0.81
CROCCP3-205ENST00000591316 ATF7IP2Q5U623 682 aa20.13■□□□□ 0.81
CROCCP3-205ENST00000591316 PPP4R3CPQ6ZMV5 832 aa20.13■□□□□ 0.81
CROCCP3-205ENST00000591316 ZNF507Q8TCN5 953 aa20.13■□□□□ 0.81
CROCCP3-205ENST00000591316 SYAP1Q96A49 352 aaPredicted RBP20.13■□□□□ 0.81
CROCCP3-205ENST00000591316 ZBTB45Q96K62 511 aaPredicted RBP20.13■□□□□ 0.81
CROCCP3-205ENST00000591316 ACO2Q99798 780 aaKnown RBP20.13■□□□□ 0.81
CROCCP3-205ENST00000591316 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.13■□□□□ 0.815e-6■■■□□ 16.3
CROCCP3-205ENST00000591316 ACTN1P12814 892 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 ABCD1P33897 745 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 MATR3P43243 847 aaKnown RBP eCLIP20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 LIG4P49917 911 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 ALCAMQ13740 583 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 TMEM240Q5SV17 173 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 NOTUMQ6P988 496 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 EPM2AIP1Q7L775 607 aaPredicted RBP20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 ZBTB33Q86T24 672 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 MAP4K3Q8IVH8 894 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 MYOCDQ8IZQ8 938 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 FTHL17Q9BXU8 183 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 CHST12Q9NRB3 414 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 EXOC7Q9UPT5 735 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 TET1Q8NFU7 2136 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 SIP14410 1827 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 PDE4DIPQ5VU43 2346 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 A0A1B0GUA9 196 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 ZBBXA8MT70 800 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 TISP43B9A030 160 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 ANKRD63C9JTQ0 380 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 HNRNPDLO14979 420 aaKnown RBP20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 EIF3DO15371 548 aaKnown RBP eCLIP20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 SCP2P22307 547 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 AXLP30530 894 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 HOXD13P35453 343 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 PRCPP42785 496 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 MORC3Q14149 939 aa20.12■□□□□ 0.81
CROCCP3-205ENST00000591316 EEF1DP3Q658K8 133 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms