RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-219ENST00000590953 LIG1P18858 919 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 WDR5P61964 334 aaKnown RBP10.92□□□□□ -0.66
RANBP3-219ENST00000590953 STRN3Q13033 797 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 COASYQ13057 564 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 PRPF4BQ13523 1007 aaKnown RBP10.92□□□□□ -0.66
RANBP3-219ENST00000590953 CUL4BQ13620 913 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 ALCAMQ13740 583 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 DSC3Q14574 896 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 AMHR2Q16671 573 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 TMEM132AQ24JP5 1023 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 TCTN1Q2MV58 587 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 NOTUMQ6P988 496 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 SLC24A5Q71RS6 500 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 HAUS6Q7Z4H7 955 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 SFR1Q86XK3 245 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 ELOA2Q8IYF1 753 aaPredicted RBP10.92□□□□□ -0.66
RANBP3-219ENST00000590953 GRAMD1CQ8IYS0 662 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 TMEM161BQ8NDZ6 487 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 PHOSPHO2Q8TCD6 241 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 ADAM2Q99965 735 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 CCDC113Q9H0I3 377 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 BLZF1Q9H2G9 400 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 ST6GALNAC4Q9H4F1 302 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 MRPL44Q9H9J2 332 aaKnown RBP10.92□□□□□ -0.66
RANBP3-219ENST00000590953 OLFML3Q9NRN5 406 aa10.92□□□□□ -0.66
RANBP3-219ENST00000590953 CXXC1Q9P0U4 656 aaPredicted RBP10.92□□□□□ -0.66
RANBP3-219ENST00000590953 LAMA2P24043 3122 aaKnown RBP10.92□□□□□ -0.66
RANBP3-219ENST00000590953 CNTNAP2Q9UHC6 1331 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 MGEA5O60502 916 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 STAG3L1P0CL83 205 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 ARF4P18085 180 aaPredicted RBP10.91□□□□□ -0.66
RANBP3-219ENST00000590953 SARSP49591 514 aaKnown RBP10.91□□□□□ -0.66
RANBP3-219ENST00000590953 GTF2BQ00403 316 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 POSTNQ15063 836 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 TWF2Q6IBS0 349 aaKnown RBP10.91□□□□□ -0.66
RANBP3-219ENST00000590953 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.91□□□□□ -0.66
RANBP3-219ENST00000590953 STXBP4Q6ZWJ1 553 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 ZNF720Q7Z2F6 126 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 APBB1IPQ7Z5R6 666 aaPredicted RBP10.91□□□□□ -0.66
RANBP3-219ENST00000590953 RTN4RL1Q86UN2 441 aaPredicted RBP10.91□□□□□ -0.66
RANBP3-219ENST00000590953 MYOCDQ8IZQ8 938 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 LINC01599Q8WXQ3 324 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 HVCN1Q96D96 273 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 FIZ1Q96SL8 496 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 TRAIPQ9BWF2 469 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 MRPL4Q9BYD3 311 aaKnown RBP10.91□□□□□ -0.66
RANBP3-219ENST00000590953 LMBRD1Q9NUN5 540 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 EXOC1Q9NV70 894 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 COLQQ9Y215 455 aaPredicted RBP10.91□□□□□ -0.66
RANBP3-219ENST00000590953 PCDHB13Q9Y5F0 798 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 MICAL3Q7RTP6 2002 aa10.91□□□□□ -0.66
RANBP3-219ENST00000590953 A0A0U1RQF3 1178 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.9□□□□□ -0.66
RANBP3-219ENST00000590953 A0A1B0GUA9 196 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.9□□□□□ -0.66
RANBP3-219ENST00000590953 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.9□□□□□ -0.66
RANBP3-219ENST00000590953 C9IYK1 514 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 N4BP3O15049 544 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 SMC2O95347 1197 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 GCNT3O95395 438 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 ATP2A2P16615 1042 aaKnown RBP10.9□□□□□ -0.66
RANBP3-219ENST00000590953 CASP1P29466 404 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 NMT1P30419 496 aaKnown RBP10.9□□□□□ -0.66
RANBP3-219ENST00000590953 HOXA11P31270 313 aaPredicted RBP10.9□□□□□ -0.66
RANBP3-219ENST00000590953 RAB27AP51159 221 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 FAM189BP81408 668 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 DEFB103AP81534 67 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 DPYDQ12882 1025 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 PSMD2Q13200 908 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 FAM26FQ5R3K3 315 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 SLC27A1Q6PCB7 646 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 NPAS4Q8IUM7 802 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 TOP1MTQ969P6 601 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 CPB2Q96IY4 423 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 ADPGKQ9BRR6 497 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 TRIM6Q9C030 488 aaPredicted RBP10.9□□□□□ -0.66
RANBP3-219ENST00000590953 ELAC1Q9H777 363 aaKnown RBP10.9□□□□□ -0.66
RANBP3-219ENST00000590953 TBC1D7Q9P0N9 293 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 LRFN2Q9ULH4 789 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 TBX20Q9UMR3 447 aa10.9□□□□□ -0.66
RANBP3-219ENST00000590953 EIF3DO15371 548 aaKnown RBP eCLIP10.89□□□□□ -0.67
RANBP3-219ENST00000590953 B4GALT5O43286 388 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 KLRC4O43908 158 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 EOMESO95936 686 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 RPN1P04843 607 aaKnown RBP10.89□□□□□ -0.67
RANBP3-219ENST00000590953 PRR29P0C7W0 189 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 EHHADHQ08426 723 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 KCNB1Q14721 858 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 KMT5BQ4FZB7 885 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 NT5DC1Q5TFE4 455 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 ATF7IP2Q5U623 682 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 ZPBP2Q6X784 338 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 TAS1R3Q7RTX0 852 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 ECHDC2Q86YB7 292 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 MAP4K3Q8IVH8 894 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 HERC6Q8IVU3 1022 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 HACE1Q8IYU2 909 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 PGBD4Q96DM1 585 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 BICD1Q96G01 975 aa10.89□□□□□ -0.67
RANBP3-219ENST00000590953 ACCSQ96QU6 501 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms