RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 KSR1Q8IVT5 923 aa19.98■□□□□ 0.79
VAT1-208ENST00000590924 C4orf19Q8IY42 314 aa19.98■□□□□ 0.79
VAT1-208ENST00000590924 ZNF396Q96N95 335 aaPredicted RBP19.98■□□□□ 0.79
VAT1-208ENST00000590924 LXNQ9BS40 222 aa19.98■□□□□ 0.79
VAT1-208ENST00000590924 PHF7Q9BWX1 381 aaPredicted RBP19.98■□□□□ 0.79
VAT1-208ENST00000590924 IFT122Q9HBG6 1241 aa19.98■□□□□ 0.79
VAT1-208ENST00000590924 FAM105AQ9NUU6 356 aa19.98■□□□□ 0.79
VAT1-208ENST00000590924 ZDHHC9Q9Y397 364 aa19.98■□□□□ 0.79
VAT1-208ENST00000590924 COL4A3BPQ9Y5P4 624 aa19.98■□□□□ 0.79
VAT1-208ENST00000590924 MORC2Q9Y6X9 1032 aaPredicted RBP19.98■□□□□ 0.79
VAT1-208ENST00000590924 DENND4AQ7Z401 1863 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 CARNS1A5YM72 827 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 ZNF623O75123 536 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 RFC5P40937 340 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 ALDH7A1P49419 539 aaKnown RBP19.97■□□□□ 0.79
VAT1-208ENST00000590924 POLGP54098 1239 aaPredicted RBP19.97■□□□□ 0.79
VAT1-208ENST00000590924 BCAR1P56945 870 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 ATP2C1P98194 919 aaPredicted RBP19.97■□□□□ 0.79
VAT1-208ENST00000590924 SPIRE1Q08AE8 756 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 PDIA5Q14554 519 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 ARL6IP4Q66PJ3 421 aaKnown RBP19.97■□□□□ 0.79
VAT1-208ENST00000590924 ANKRD54Q6NXT1 300 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 CATSPER4Q7RTX7 472 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 CEP170P1Q96L14 293 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 TTC12Q9H892 705 aaPredicted RBP19.97■□□□□ 0.79
VAT1-208ENST00000590924 AGPAT5Q9NUQ2 364 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 ATP6V1DQ9Y5K8 247 aa19.97■□□□□ 0.79
VAT1-208ENST00000590924 KMT2EQ8IZD2 1858 aa19.96■□□□□ 0.79
VAT1-208ENST00000590924 GAS2O43903 313 aaKnown RBP19.96■□□□□ 0.79
VAT1-208ENST00000590924 HOXD11P31277 338 aaPredicted RBP19.96■□□□□ 0.79
VAT1-208ENST00000590924 TXKP42681 527 aa19.96■□□□□ 0.79
VAT1-208ENST00000590924 SMC1AQ14683 1233 aaKnown RBP19.96■□□□□ 0.79
VAT1-208ENST00000590924 GLB1LQ6UWU2 654 aa19.96■□□□□ 0.79
VAT1-208ENST00000590924 ZNF579Q8NAF0 562 aaKnown RBP19.96■□□□□ 0.79
VAT1-208ENST00000590924 PSPC1Q8WXF1 523 aaKnown RBP19.96■□□□□ 0.79
VAT1-208ENST00000590924 LPPQ93052 612 aa19.96■□□□□ 0.79
VAT1-208ENST00000590924 TMEM169Q96HH4 297 aa19.96■□□□□ 0.79
VAT1-208ENST00000590924 IPO9Q96P70 1041 aaKnown RBP19.96■□□□□ 0.79
VAT1-208ENST00000590924 S1PR5Q9H228 398 aa19.96■□□□□ 0.79
VAT1-208ENST00000590924 C2orf16Q68DN1 1984 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 HOXB8P17481 243 aaPredicted RBP19.95■□□□□ 0.78
VAT1-208ENST00000590924 YWHABP31946 246 aaKnown RBP19.95■□□□□ 0.78
VAT1-208ENST00000590924 TECP42680 631 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 FXR2P51116 673 aaKnown RBP eCLIP19.95■□□□□ 0.782e-9■■■□□ 15.8
VAT1-208ENST00000590924 SF3A1Q15459 793 aaKnown RBP19.95■□□□□ 0.78
VAT1-208ENST00000590924 NCAPH2Q6IBW4 605 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 FAM173BQ6P4H8 233 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 SYCE2Q6PIF2 218 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 OTUD6AQ7L8S5 288 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 SRGAP1Q7Z6B7 1085 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 MRPL43Q8N983 215 aaKnown RBP19.95■□□□□ 0.78
VAT1-208ENST00000590924 EDAQ92838 391 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 TBC1D13Q9NVG8 400 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 RGL1Q9NZL6 768 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 STK24Q9Y6E0 443 aa19.95■□□□□ 0.78
VAT1-208ENST00000590924 C2orf71A6NGG8 1288 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 MEIS3P2A8K0S8 358 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 NT5C1B-RDH14C9J2C7 533 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 ZC3H11AO75152 810 aaKnown RBP eCLIP19.94■□□□□ 0.78
VAT1-208ENST00000590924 BMS1Q14692 1282 aaKnown RBP19.94■□□□□ 0.78
VAT1-208ENST00000590924 EMC2Q15006 297 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 NOMO2Q5JPE7 1267 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 LLGL2Q6P1M3 1020 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 DTHD1Q6ZMT9 781 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 HFE2Q6ZVN8 426 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 TCP11Q8WWU5 503 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 PRPF31Q8WWY3 499 aaKnown RBP19.94■□□□□ 0.78
VAT1-208ENST00000590924 CASP10Q92851 521 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 TMEM143Q96AN5 459 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 DYDC2Q96IM9 177 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 RAB34Q9BZG1 259 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 ZSWIM4Q9H7M6 989 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 NRDE2Q9H7Z3 1164 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 CFAP45Q9UL16 551 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 HCFC2Q9Y5Z7 792 aa19.94■□□□□ 0.78
VAT1-208ENST00000590924 ZDBF2Q9HCK1 2354 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 ASAP2O43150 1006 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 OFD1O75665 1012 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 NASPP49321 788 aaPredicted RBP19.93■□□□□ 0.78
VAT1-208ENST00000590924 LAMTOR4Q0VGL1 99 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 SLC39A14Q15043 492 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 PTPAQ15257 358 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 FOXD4L5Q5VV16 416 aaPredicted RBP19.93■□□□□ 0.78
VAT1-208ENST00000590924 TMEM173Q86WV6 379 aaPredicted RBP19.93■□□□□ 0.78
VAT1-208ENST00000590924 FOXD4L4Q8WXT5 416 aaPredicted RBP19.93■□□□□ 0.78
VAT1-208ENST00000590924 PGBD4Q96DM1 585 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 RPGRIP1Q96KN7 1286 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 USP28Q96RU2 1077 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 ZBP1Q9H171 429 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 KCNH6Q9H252 994 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 MINDY3Q9H8M7 445 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 PCDHB2Q9Y5E7 798 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 CLIC4Q9Y696 253 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 MTCL1Q9Y4B5 1905 aaKnown RBP19.93■□□□□ 0.78
VAT1-208ENST00000590924 PIEZO1Q92508 2521 aa19.93■□□□□ 0.78
VAT1-208ENST00000590924 WDFY4Q6ZS81 3184 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 CYP4A11Q02928 519 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 CTTNQ14247 550 aaKnown RBP19.92■□□□□ 0.78
VAT1-208ENST00000590924 LONRF3Q496Y0 759 aa19.92■□□□□ 0.78
VAT1-208ENST00000590924 TPRNQ4KMQ1 711 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms