RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 TMEM143Q96AN5 459 aa15.58■□□□□ 0.08
SF3A2-205ENST00000590034 KLHL5Q96PQ7 755 aa15.58■□□□□ 0.08
SF3A2-205ENST00000590034 DHX33Q9H6R0 707 aaKnown RBP15.58■□□□□ 0.08
SF3A2-205ENST00000590034 SFXN1Q9H9B4 322 aa15.58■□□□□ 0.08
SF3A2-205ENST00000590034 BMP2KQ9NSY1 1161 aaPredicted RBP15.58■□□□□ 0.08
SF3A2-205ENST00000590034 TDRD15B5MCY1 1934 aaKnown RBP15.58■□□□□ 0.08
SF3A2-205ENST00000590034 PROB1E7EW31 1015 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 DTNBO60941 627 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 QARSP47897 775 aaKnown RBP15.57■□□□□ 0.08
SF3A2-205ENST00000590034 STK3Q13188 491 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 LETM2Q2VYF4 491 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 CWF19L1Q69YN2 538 aaKnown RBP15.57■□□□□ 0.08
SF3A2-205ENST00000590034 ASCL5Q7RTU5 278 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 TMEM87AQ8NBN3 555 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 PRPF31Q8WWY3 499 aaKnown RBP15.57■□□□□ 0.08
SF3A2-205ENST00000590034 SLC7A3Q8WY07 619 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 HAS1Q92839 578 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 PGBD4Q96DM1 585 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 ZNF274Q96GC6 653 aaPredicted RBP15.57■□□□□ 0.08
SF3A2-205ENST00000590034 SNX27Q96L92 541 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 JPH2Q9BR39 696 aaPredicted RBP15.57■□□□□ 0.08
SF3A2-205ENST00000590034 IRF2BPLQ9H1B7 796 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 RSAD1Q9HA92 442 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 MARCH5Q9NX47 278 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 GVINP1Q7Z2Y8 2422 aa15.57■□□□□ 0.08
SF3A2-205ENST00000590034 CARNS1A5YM72 827 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 CPLX1O14810 134 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 REC8O95072 547 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 POMCP01189 267 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 SRGAP2CP0DJJ0 459 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 LAMTOR4Q0VGL1 99 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 ASTLQ6HA08 431 aaPredicted RBP15.56■□□□□ 0.08
SF3A2-205ENST00000590034 GALNT17Q6IS24 598 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 KRT25Q7Z3Z0 450 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 SRGAP1Q7Z6B7 1085 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 PPFIBP1Q86W92 1011 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 PLCD3Q8N3E9 789 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 SMG8Q8ND04 991 aaKnown RBP15.56■□□□□ 0.08
SF3A2-205ENST00000590034 URGCPQ8TCY9 931 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 CEP170P1Q96L14 293 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 LXNQ9BS40 222 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 PHF20Q9BVI0 1012 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 GJB4Q9NTQ9 266 aa15.56■□□□□ 0.08
SF3A2-205ENST00000590034 CNTNAP2Q9UHC6 1331 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 NRP1O14786 923 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 ZBTB39O15060 712 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 N4BP1O75113 896 aaKnown RBP15.55■□□□□ 0.08
SF3A2-205ENST00000590034 NPR3P17342 541 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 KLRC2P26717 231 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 SPIRE1Q08AE8 756 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 EMC2Q15006 297 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 CCDC149Q6ZUS6 474 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 TAS1R1Q7RTX1 841 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 RNF168Q8IYW5 571 aaPredicted RBP15.55■□□□□ 0.08
SF3A2-205ENST00000590034 FAM177A1Q8N128 213 aaPredicted RBP15.55■□□□□ 0.08
SF3A2-205ENST00000590034 OXER1Q8TDS5 423 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 PSPC1Q8WXF1 523 aaKnown RBP15.55■□□□□ 0.08
SF3A2-205ENST00000590034 FAM20AQ96MK3 541 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 TMEM175Q9BSA9 504 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 EIF2AQ9BY44 585 aaKnown RBP15.55■□□□□ 0.08
SF3A2-205ENST00000590034 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 RGL1Q9NZL6 768 aa15.55■□□□□ 0.08
SF3A2-205ENST00000590034 MTCL1Q9Y4B5 1905 aaKnown RBP15.55■□□□□ 0.08
SF3A2-205ENST00000590034 DCHS1Q96JQ0 3298 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 F8W810 466 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 C2CD2LO14523 706 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 EFEMP2O95967 443 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 SOD2P04179 222 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 P4HBP07237 508 aaKnown RBP15.54■□□□□ 0.08
SF3A2-205ENST00000590034 NCLP19338 710 aaKnown RBP15.54■□□□□ 0.08
SF3A2-205ENST00000590034 YWHABP31946 246 aaKnown RBP15.54■□□□□ 0.08
SF3A2-205ENST00000590034 NBL1P41271 181 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 SCRN1Q12765 414 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 EARS2Q5JPH6 523 aaKnown RBP15.54■□□□□ 0.08
SF3A2-205ENST00000590034 PPP4R3AQ6IN85 833 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 NEK8Q86SG6 692 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 FERMT3Q86UX7 667 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 C4orf19Q8IY42 314 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 COLGALT2Q8IYK4 626 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 RNF149Q8NC42 400 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 EMILIN2Q9BXX0 1053 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 SLKQ9H2G2 1235 aaPredicted RBP15.54■□□□□ 0.08
SF3A2-205ENST00000590034 KCNK12Q9HB15 430 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 XPNPEP1Q9NQW7 623 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 MAN1C1Q9NR34 630 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 FAN1Q9Y2M0 1017 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 PRG3Q9Y2Y8 225 aaPredicted RBP15.54■□□□□ 0.08
SF3A2-205ENST00000590034 HES2Q9Y543 173 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 IPPQ9Y573 584 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 CYP46A1Q9Y6A2 500 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 DOCK6Q96HP0 2047 aa15.54■□□□□ 0.08
SF3A2-205ENST00000590034 CCDC194A0A1B0GVG4 234 aa15.53■□□□□ 0.08
SF3A2-205ENST00000590034 PRR23AA6NEV1 266 aa15.53■□□□□ 0.08
SF3A2-205ENST00000590034 FAM205CA6NFA0 338 aa15.53■□□□□ 0.08
SF3A2-205ENST00000590034 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
SF3A2-205ENST00000590034 INPPL1O15357 1258 aa15.53■□□□□ 0.08
SF3A2-205ENST00000590034 TEX28O15482 410 aa15.53■□□□□ 0.08
SF3A2-205ENST00000590034 PI15O43692 258 aa15.53■□□□□ 0.08
SF3A2-205ENST00000590034 TSPAN1O60635 241 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms