RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 MRPL17Q9NRX2 175 aaKnown RBP14.4□□□□□ -0.1
PRKCSH-210ENST00000589990 PRG3Q9Y2Y8 225 aaPredicted RBP14.4□□□□□ -0.1
PRKCSH-210ENST00000589990 PCDHB2Q9Y5E7 798 aa14.4□□□□□ -0.1
PRKCSH-210ENST00000589990 NUMBLQ9Y6R0 609 aa14.4□□□□□ -0.1
PRKCSH-210ENST00000589990 WDR64B1ANS9 1081 aa14.39□□□□□ -0.11
PRKCSH-210ENST00000589990 ANHXE9PGG2 379 aa14.39□□□□□ -0.11
PRKCSH-210ENST00000589990 ZNF623O75123 536 aa14.39□□□□□ -0.11
PRKCSH-210ENST00000589990 LAMP2P13473 410 aa14.39□□□□□ -0.11
PRKCSH-210ENST00000589990 RTN1Q16799 776 aa14.39□□□□□ -0.11
PRKCSH-210ENST00000589990 UNC45AQ9H3U1 944 aa14.39□□□□□ -0.11
PRKCSH-210ENST00000589990 NRBP2Q9NSY0 501 aa14.39□□□□□ -0.11
PRKCSH-210ENST00000589990 TCEAL9Q9UHQ7 104 aa14.39□□□□□ -0.11
PRKCSH-210ENST00000589990 FAN1Q9Y2M0 1017 aa14.39□□□□□ -0.11
PRKCSH-210ENST00000589990 IGKV6-21A0A0C4DH24 114 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 DCDC2BA2VCK2 349 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 MSH4O15457 936 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 EFEMP2O95967 443 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 GLUD1P00367 558 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 SOD2P04179 222 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 URODP06132 367 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 CENPBP07199 599 aaPredicted RBP14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 SFPQP23246 707 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 GPC5P78333 572 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 SETQ01105 290 aaPredicted RBP14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 SNW1Q13573 536 aaKnown RBP14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 VARS2Q5ST30 1063 aaKnown RBP14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 UBXN11Q5T124 520 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 KIAA0319Q5VV43 1072 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 CREB3L3Q68CJ9 461 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 CATSPER4Q7RTX7 472 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 PALB2Q86YC2 1186 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 RHPN2Q8IUC4 686 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 GLYCTKQ8IVS8 523 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 FGF14Q92915 247 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 NLRP4Q96MN2 994 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 HERC2P3Q9BVR0 1158 aa14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 SEPT9Q9UHD8 586 aaPredicted RBP14.38□□□□□ -0.11
PRKCSH-210ENST00000589990 MTCL1Q9Y4B5 1905 aaKnown RBP14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 KINO60870 393 aaKnown RBP14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 ALDH2P05091 517 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 CD72P21854 359 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 STARD6P59095 220 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 NTHL1P78549 312 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 NONOQ15233 471 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 TSSK4Q6SA08 328 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 PARM1Q6UWI2 310 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 RNF168Q8IYW5 571 aaPredicted RBP14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 ZNF710Q8N1W2 664 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 STAMQ92783 540 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 NT5C3AQ9H0P0 336 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 MINDY3Q9H8M7 445 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 RSAD1Q9HA92 442 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 IFT122Q9HBG6 1241 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 SLC2A4RGQ9NR83 387 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 RBM28Q9NW13 759 aaKnown RBP14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 SPATA6Q9NWH7 488 aaPredicted RBP14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 SUCLA2Q9P2R7 463 aaPredicted RBP14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 NCDNQ9UBB6 729 aa14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 RALYQ9UKM9 306 aaKnown RBP14.37□□□□□ -0.11
PRKCSH-210ENST00000589990 ZBTB43O43298 467 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 TGM5O43548 720 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 ADH1AP07327 375 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 RPL17P18621 184 aaKnown RBP14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 TGM1P22735 817 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 HOXA11P31270 313 aaPredicted RBP14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 CIITAP33076 1130 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 RAB27AP51159 221 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 NECTIN1Q15223 517 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 PFKFB3Q16875 520 aaPredicted RBP14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 MRPL10Q7Z7H8 261 aaKnown RBP14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 TEX2Q8IWB9 1127 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 COLGALT2Q8IYK4 626 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 URGCPQ8TCY9 931 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 TMEM175Q9BSA9 504 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 NIFKQ9BYG3 293 aaKnown RBP14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 RHOBTB2Q9BYZ6 727 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 PIDD1Q9HB75 910 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 RXFP1Q9HBX9 757 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 PARD6AQ9NPB6 346 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 AGPAT5Q9NUQ2 364 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 MIOSQ9NXC5 875 aa14.36□□□□□ -0.11
PRKCSH-210ENST00000589990 GOLGA8AA7E2F4 631 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 GOLGA8BA8MQT2 603 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 hCG_1984214I3L0E3 225 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 GAS7O60861 476 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 PAPLNO95428 1278 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 SKIP12755 728 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 ADD1P35611 737 aaKnown RBP14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 OR1G1P47890 313 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 GLUD2P49448 558 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 CSTF1Q05048 431 aaKnown RBP14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 PLA2G4FQ68DD2 849 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 SYNE3Q6ZMZ3 975 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 REXO1Q8N1G1 1221 aaKnown RBP14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 ZNF713Q8N859 430 aaPredicted RBP14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 ZNF579Q8NAF0 562 aaKnown RBP14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 SMG8Q8ND04 991 aaKnown RBP14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 RABGGTAQ92696 567 aa14.35□□□□□ -0.11
PRKCSH-210ENST00000589990 SLC5A5Q92911 643 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms