RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ACTR2P61160 394 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 PFKPQ01813 784 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 MTMR1Q13613 665 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 LONRF3Q496Y0 759 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 PLA2G2CQ5R387 149 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 TCEAL6Q6IPX3 200 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 C19orf48Q6RUI8 117 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 POTEHQ6S545 545 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 ZNF852Q6ZMS4 543 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 ZNF589Q86UQ0 364 aaPredicted RBP6.95□□□□□ -1.3
VPS25-204ENST00000589577 RNF168Q8IYW5 571 aaPredicted RBP6.95□□□□□ -1.3
VPS25-204ENST00000589577 C12orf50Q8NA57 414 aaPredicted RBP6.95□□□□□ -1.3
VPS25-204ENST00000589577 ESR2Q92731 530 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 FGF13Q92913 245 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 PHKBQ93100 1093 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 TCEAL3Q969E4 200 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 KIF12Q96FN5 646 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 RPS6KC1Q96S38 1066 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 ZSCAN10Q96SZ4 725 aaPredicted RBP6.95□□□□□ -1.3
VPS25-204ENST00000589577 PRKD2Q9BZL6 878 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 PLA2G2FQ9BZM2 168 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 ARRDC1-AS1Q9H2J1 176 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 AZI2Q9H6S1 392 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 RIOX1Q9H6W3 641 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 DCTPP1Q9H773 170 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 RXFP1Q9HBX9 757 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 C2orf42Q9NWW7 574 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 MARCH5Q9NX47 278 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 ZDHHC7Q9NXF8 308 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 SLC9A2Q9UBY0 812 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 ZFP37Q9Y6Q3 630 aaPredicted RBP6.95□□□□□ -1.3
VPS25-204ENST00000589577 APC2O95996 2303 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 COL1A2P08123 1366 aa6.95□□□□□ -1.3
VPS25-204ENST00000589577 ACACAQ13085 2346 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 A0A0D9SFI3 127 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 F8W810 466 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 AXIN1O15169 862 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 TGM5O43548 720 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 EPN2O95208 641 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 ATG7O95352 703 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 SOD2P04179 222 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 ZSCAN20P17040 1043 aaPredicted RBP6.94□□□□□ -1.3
VPS25-204ENST00000589577 ATP4AP20648 1035 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 EIF4BP23588 611 aaKnown RBP6.94□□□□□ -1.3
VPS25-204ENST00000589577 PHKA2P46019 1235 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 RAP1GAPP47736 663 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 CCR3P51677 355 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 CLCN3P51790 818 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 AK2P54819 239 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 COL28A1Q2UY09 1125 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 NOMO2Q5JPE7 1267 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 WDR44Q5JSH3 913 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 LILRA6Q6PI73 481 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 MTSS1LQ765P7 747 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 GRASPQ7Z6J2 395 aaPredicted RBP6.94□□□□□ -1.3
VPS25-204ENST00000589577 PROSER1Q86XN7 944 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 SMC5Q8IY18 1101 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 LINC01465Q8N7H1 131 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 ITFG1Q8TB96 612 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 OTUD7AQ8TE49 926 aaPredicted RBP6.94□□□□□ -1.3
VPS25-204ENST00000589577 HDAC7Q8WUI4 952 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 CDHR1Q96JP9 859 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 ZNF668Q96K58 619 aaPredicted RBP6.94□□□□□ -1.3
VPS25-204ENST00000589577 FAM227BQ96M60 508 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 IER2Q9BTL4 223 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 PHF20Q9BVI0 1012 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 HERC2P3Q9BVR0 1158 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 GBP3Q9H0R5 595 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 PIDD1Q9HB75 910 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 NDRG2Q9UN36 371 aaKnown RBP6.94□□□□□ -1.3
VPS25-204ENST00000589577 INPP5FQ9Y2H2 1132 aa6.94□□□□□ -1.3
VPS25-204ENST00000589577 COL12A1Q99715 3063 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 PNMA6FA0A0J9YX94 578 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 PCNX2A6NKB5 2137 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 B4E1Z4 1266 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 PIK3CDO00329 1044 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 NRG2O14511 850 aaPredicted RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 HYAL3O43820 417 aaPredicted RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 HBP1O60381 514 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 CSDE1O75534 798 aaKnown RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 OFD1O75665 1012 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 ZMYND10O75800 440 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 PAPSS2O95340 614 aaPredicted RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 CCNE2O96020 404 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 URODP06132 367 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 DARSP14868 501 aaKnown RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 CNR2P34972 360 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 CXCL12P48061 93 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 SLC26A2P50443 739 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 NLRP11P59045 1033 aaKnown RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 ITGB3BPQ13352 177 aaPredicted RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 PPP2R5DQ14738 602 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 SEC23AQ15436 765 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 SH3PXD2AQ5TCZ1 1133 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 HEATR6Q6AI08 1181 aaKnown RBP6.93□□□□□ -1.3
VPS25-204ENST00000589577 KIAA1211LQ6NV74 962 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 LONP2Q86WA8 852 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 CHD1LQ86WJ1 897 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 IQCA1Q86XH1 822 aa6.93□□□□□ -1.3
VPS25-204ENST00000589577 PALB2Q86YC2 1186 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms