RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 SNX29Q8TEQ0 813 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 PRIMPOLQ96LW4 560 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 CDCA3Q99618 268 aaPredicted RBP16.02■□□□□ 0.15
DDX39A-208ENST00000588692 IGFLR1Q9H665 355 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 RSAD1Q9HA92 442 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 NGRNQ9NPE2 291 aaKnown RBP16.02■□□□□ 0.15
DDX39A-208ENST00000588692 UBN1Q9NPG3 1134 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.15
DDX39A-208ENST00000588692 LRRIQ4A6NIV6 560 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 MEIS3P2A8K0S8 358 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 CYP11B2P19099 503 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 GTF2F1P35269 517 aaKnown RBP eCLIP16.01■□□□□ 0.151e-8■■□□□ 14.1
DDX39A-208ENST00000588692 PBX3P40426 434 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 NRIP1P48552 1158 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 BCAR1P56945 870 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 ATP2C1P98194 919 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-208ENST00000588692 RNASELQ05823 741 aaKnown RBP16.01■□□□□ 0.15
DDX39A-208ENST00000588692 AMHR2Q16671 573 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 KRT79Q5XKE5 535 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 CDCA2Q69YH5 1023 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-208ENST00000588692 AGMOQ6ZNB7 445 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 ZBTB8OSQ8IWT0 167 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 BACH2Q9BYV9 841 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 CSRNP2Q9H175 543 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 C2orf40Q9H1Z8 148 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 TLE6Q9H808 572 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 GPRC5CQ9NQ84 441 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 ENTPD7Q9NQZ7 604 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 KANSL3Q9P2N6 904 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 INPP5FQ9Y2H2 1132 aa16.01■□□□□ 0.15
DDX39A-208ENST00000588692 ZC3H11AO75152 810 aaKnown RBP eCLIP16■□□□□ 0.15
DDX39A-208ENST00000588692 TBX10O75333 385 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 IL9P15248 144 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 ARF4P18085 180 aaPredicted RBP16■□□□□ 0.15
DDX39A-208ENST00000588692 NDUFV1P49821 464 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 ERVFC1P60507 584 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 CUL4AQ13619 759 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 PPP2R5AQ15172 486 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 LONRF3Q496Y0 759 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 LARP1BQ659C4 914 aaKnown RBP16■□□□□ 0.15
DDX39A-208ENST00000588692 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 MAEAQ7L5Y9 396 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 HACE1Q8IYU2 909 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 TMEM169Q96HH4 297 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 TCF25Q9BQ70 676 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
DDX39A-208ENST00000588692 PRMT7Q9NVM4 692 aaPredicted RBP16■□□□□ 0.15
DDX39A-208ENST00000588692 KIAA1024Q9UPX6 916 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 IPPQ9Y573 584 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 PCDHGC5Q9Y5F6 944 aa16■□□□□ 0.15
DDX39A-208ENST00000588692 LINC01565O15544 149 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 ITGA4P13612 1032 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 NAMPTP43490 491 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 DLX2Q07687 328 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-208ENST00000588692 BMS1Q14692 1282 aaKnown RBP15.99■□□□□ 0.15
DDX39A-208ENST00000588692 ECM1Q16610 540 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 DUSP6Q16828 381 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 FAM187BQ17R55 369 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 ARL6IP4Q66PJ3 421 aaKnown RBP15.99■□□□□ 0.15
DDX39A-208ENST00000588692 SLC27A1Q6PCB7 646 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 RBM23Q86U06 439 aaKnown RBP15.99■□□□□ 0.15
DDX39A-208ENST00000588692 FAM178BQ8IXR5 827 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 SMG8Q8ND04 991 aaKnown RBP15.99■□□□□ 0.15
DDX39A-208ENST00000588692 KIFAP3Q92845 792 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 CPB2Q96IY4 423 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 TRIM6Q9C030 488 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-208ENST00000588692 NRDE2Q9H7Z3 1164 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 DAXXQ9UER7 740 aaPredicted RBP15.99■□□□□ 0.15
DDX39A-208ENST00000588692 STK39Q9UEW8 545 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 PRKAG3Q9UGI9 489 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 CD207Q9UJ71 328 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 ZMYM2Q9UBW7 1377 aa15.99■□□□□ 0.15
DDX39A-208ENST00000588692 TDRD15B5MCY1 1934 aaKnown RBP15.99■□□□□ 0.15
DDX39A-208ENST00000588692 INPPL1O15357 1258 aa15.98■□□□□ 0.15
DDX39A-208ENST00000588692 SRGAP2BP0DMP2 458 aa15.98■□□□□ 0.15
DDX39A-208ENST00000588692 PDCP20941 246 aa15.98■□□□□ 0.15
DDX39A-208ENST00000588692 SMAD4Q13485 552 aaKnown RBP15.98■□□□□ 0.15
DDX39A-208ENST00000588692 SMC1AQ14683 1233 aaKnown RBP15.98■□□□□ 0.15
DDX39A-208ENST00000588692 PLPP4Q5VZY2 271 aa15.98■□□□□ 0.15
DDX39A-208ENST00000588692 TMC7Q7Z402 723 aa15.98■□□□□ 0.15
DDX39A-208ENST00000588692 BRAPQ7Z569 592 aa15.98■□□□□ 0.15
DDX39A-208ENST00000588692 KCTD17Q8N5Z5 321 aa15.98■□□□□ 0.15
DDX39A-208ENST00000588692 MSLNLQ96KJ4 702 aa15.98■□□□□ 0.15
DDX39A-208ENST00000588692 TMEM175Q9BSA9 504 aa15.98■□□□□ 0.15
DDX39A-208ENST00000588692 EIF2AQ9BY44 585 aaKnown RBP15.98■□□□□ 0.15
DDX39A-208ENST00000588692 DNM3Q9UQ16 869 aa15.98■□□□□ 0.15
DDX39A-208ENST00000588692 A0A1B0GUA9 196 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 B4GALT5O43286 388 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 EYA4O95677 639 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 GALTP07902 379 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 COASYQ13057 564 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 SMAD2Q15796 467 aaKnown RBP15.97■□□□□ 0.15
DDX39A-208ENST00000588692 IL17AQ16552 155 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 MAPK6Q16659 721 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 DEPTORQ8TB45 409 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 BSNDQ8WZ55 320 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 IGSF21Q96ID5 467 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 IFT74Q96LB3 600 aa15.97■□□□□ 0.15
DDX39A-208ENST00000588692 FAM193BQ96PV7 902 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms