RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 HDAC9Q9UKV0 1011 aa11.2□□□□□ -0.62
LSM14A-206ENST00000588582 CPS1P31327 1500 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 CCDC195A0A1B0GUA6 201 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 FAM47DPA6NHR8 397 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 H7C1W4 665 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 UQCRFS1P1P0C7P4 283 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 CALCRLQ16602 461 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 CYP4X1Q8N118 509 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 SLC35G2Q8TBE7 412 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 DDX12PQ92771 950 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 MTBPQ96DY7 904 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 FAM192AQ9GZU8 254 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 SAYSD1Q9NPB0 183 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 TMCO1Q9UM00 188 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 R3HDM2Q9Y2K5 976 aaKnown RBP11.19□□□□□ -0.62
LSM14A-206ENST00000588582 SMIM22K7EJ46 135 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 XPOTO43592 962 aaKnown RBP11.19□□□□□ -0.62
LSM14A-206ENST00000588582 VEGFAP15692 232 aaPredicted RBP11.19□□□□□ -0.62
LSM14A-206ENST00000588582 PTPN4P29074 926 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 PSMC1P62191 440 aaKnown RBP11.19□□□□□ -0.62
LSM14A-206ENST00000588582 MRPS9P82933 396 aaKnown RBP11.19□□□□□ -0.62
LSM14A-206ENST00000588582 MTA1Q13330 715 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 NONOQ15233 471 aaKnown RBP eCLIP11.19□□□□□ -0.62
LSM14A-206ENST00000588582 C1QTNF12Q5T7M4 302 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 C16orf87Q6PH81 154 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 MARK2Q7KZI7 788 aaKnown RBP11.19□□□□□ -0.62
LSM14A-206ENST00000588582 SATL1Q86VE3 508 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 SCUBE1Q8IWY4 988 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 CTAGE3PQ8IX95 158 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 ENAHQ8N8S7 591 aaPredicted RBP11.19□□□□□ -0.62
LSM14A-206ENST00000588582 SPATA5Q8NB90 893 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 GLIS3Q8NEA6 775 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 CCDC110Q8TBZ0 833 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 SH3RF3Q8TEJ3 882 aaPredicted RBP11.19□□□□□ -0.62
LSM14A-206ENST00000588582 ABHD8Q96I13 439 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 ANKRD27Q96NW4 1050 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 PHF20Q9BVI0 1012 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 TRABDQ9H4I3 376 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 XAB2Q9HCS7 855 aaKnown RBP11.19□□□□□ -0.62
LSM14A-206ENST00000588582 PREX2Q70Z35 1606 aa11.19□□□□□ -0.62
LSM14A-206ENST00000588582 CASQ2O14958 399 aaPredicted RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 ATP2A1O14983 1001 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 RIPK2O43353 540 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 PRPF3O43395 683 aaKnown RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 EXOC3O60645 756 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 OR6B1O95007 311 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 PSMG1O95456 288 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 PAEPP09466 180 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 MAPK7Q13164 816 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 KLC3Q6P597 504 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 ZNF444Q8N0Y2 327 aaPredicted RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 GALNT4Q8N4A0 578 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 CXorf38Q8TB03 319 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 GRAMD1AQ96CP6 724 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 UNC45AQ9H3U1 944 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 IVNS1ABPQ9Y6Y0 642 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 PPIDQ08752 370 aaKnown RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 ATP1A4Q13733 1029 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 WASHC2DQ5SRD0 308 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 C6orf183Q5T699 404 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 UBAP2Q5T6F2 1119 aaKnown RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 RBM44Q6ZP01 1051 aaKnown RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 ZNF571Q7Z3V5 609 aaPredicted RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 CNBD2Q96M20 576 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 DCUN1D5Q9BTE7 237 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 SPATA16Q9BXB7 569 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 MAF1Q9H063 256 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 ASCC2Q9H1I8 757 aaPredicted RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 NAGPAQ9UK23 515 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 LRRC42Q9Y546 428 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 MYH13Q9UKX3 1938 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 TBCAO75347 108 aaKnown RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 PCCAP05165 728 aaPredicted RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 ITGA2BP08514 1039 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 PCYT1AP49585 367 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 CYP2J2P51589 502 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 KRT17Q04695 432 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 TMTC3Q6ZXV5 915 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 PRUNE1Q86TP1 453 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 GPBP1Q86WP2 473 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 ACTRT1Q8TDG2 376 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 PYDC1Q8WXC3 89 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 ATG4AQ8WYN0 398 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 ZNF333Q96JL9 665 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 AGBL1Q96MI9 1066 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 BRD8Q9H0E9 1235 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 MCM9Q9NXL9 1143 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 PLEKHG1Q9ULL1 1385 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 WDR17Q8IZU2 1322 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 KDM6AO15550 1401 aaPredicted RBP11.18□□□□□ -0.62
LSM14A-206ENST00000588582 NCAPD2Q15021 1401 aa11.18□□□□□ -0.62
LSM14A-206ENST00000588582 I3L4J1 428 aa11.17□□□□□ -0.62
LSM14A-206ENST00000588582 PODXLO00592 558 aa11.17□□□□□ -0.62
LSM14A-206ENST00000588582 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
LSM14A-206ENST00000588582 ALDH18A1P54886 795 aaKnown RBP11.17□□□□□ -0.62
LSM14A-206ENST00000588582 MKRN3Q13064 507 aaKnown RBP11.17□□□□□ -0.62
LSM14A-206ENST00000588582 C10orf76Q5T2E6 689 aa11.17□□□□□ -0.62
LSM14A-206ENST00000588582 CCDC80Q76M96 950 aa11.17□□□□□ -0.62
LSM14A-206ENST00000588582 WDR75Q8IWA0 830 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms