RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 AKR1B15C9JRZ8 316 aaPredicted RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 AKAP3O75969 853 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 C22orf31O95567 290 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 LDHAP00338 332 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 F2P00734 622 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 PIGRP01833 764 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 MYL3P08590 195 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 ZNF286BP0CG31 522 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 RARBP10826 455 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 MSNP26038 577 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 PSEN2P49810 448 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 LIG4P49917 911 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 CYP2J2P51589 502 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 IGBP1P78318 339 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 MAP2K1Q02750 393 aaPredicted RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 ENPEPQ07075 957 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 CACNB2Q08289 660 aaPredicted RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 GRIK4Q16099 956 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 FSCN1Q16658 493 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 TSR1Q2NL82 804 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 FIGNQ5HY92 759 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 MIIPQ5JXC2 388 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 LHX8Q68G74 356 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 MTHFD1LQ6UB35 978 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 ZPBP2Q6X784 338 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 INTS8Q75QN2 995 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 CNGA4Q8IV77 575 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 PDCD7Q8N8D1 485 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 CCDC112Q8NEF3 446 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 ZNF397Q8NF99 534 aaPredicted RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 BICD1Q96G01 975 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 MAP7D2Q96T17 732 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 NFKBIZQ9BYH8 718 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 UPF3AQ9H1J1 476 aaKnown RBP11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 ZMYM2Q9UBW7 1377 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 MGAMO43451 1857 aa11.48□□□□□ -0.57
CHMP1B-202ENST00000588284 HAS3O00219 553 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 ADCY6O43306 1168 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 STX10O60499 249 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 AFPP02771 609 aaKnown RBP11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 HMGCRP04035 888 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 SRGAP2CP0DJJ0 459 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 PHKA2P46019 1235 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 KCNH2Q12809 1159 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 CAPSQ13938 189 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 MFSD10Q14728 455 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 MAPK6Q16659 721 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 KIAA0753Q2KHM9 967 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 GNASQ5JWF2 1037 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 RHPN2Q8IUC4 686 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 LRRC71Q8N4P6 559 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 RNF149Q8NC42 400 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 TRPV1Q8NER1 839 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 CACTINQ8WUQ7 758 aaKnown RBP11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 TRAPPC12Q8WVT3 735 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 POMGNT1Q8WZA1 660 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 BORCS6Q96GS4 357 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 MTG1Q9BT17 334 aaPredicted RBP11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 MRPL4Q9BYD3 311 aaKnown RBP11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 HSPBP1Q9NZL4 362 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 COLQQ9Y215 455 aaPredicted RBP11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 LUC7L2Q9Y383 392 aaKnown RBP11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 STYXL1Q9Y6J8 313 aa11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHMP1B-202ENST00000588284 SMIM35A0A1B0GVV1 85 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 ESPNB1AK53 854 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 ANKRD63C9JTQ0 380 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 HNRNPDLO14979 420 aaKnown RBP11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 MSCO60682 206 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 C6orf222P0C671 652 aaPredicted RBP11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 SMIM10L2AP0DMW4 78 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 SMIM10L2BP0DMW5 78 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 CASP4P49662 377 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 MCCD1P59942 119 aaPredicted RBP11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 PTENP60484 403 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 RBL2Q08999 1139 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 CETN1Q12798 172 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 SYCP1Q15431 976 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 TCERG1LQ5VWI1 586 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 CDCA2Q69YH5 1023 aaPredicted RBP11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 NME8Q8N427 588 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 LINC01465Q8N7H1 131 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 PCSK9Q8NBP7 692 aaKnown RBP11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 SLAIN1Q8ND83 568 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 CPLX3Q8WVH0 158 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 KAT2BQ92831 832 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 ZNF830Q96NB3 372 aaPredicted RBP11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 PANX2Q96RD6 677 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 KIFC3Q9BVG8 833 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 NAA15Q9BXJ9 866 aaKnown RBP11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 INO80BQ9C086 356 aaPredicted RBP11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 PCIF1Q9H4Z3 704 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 PRMT7Q9NVM4 692 aaPredicted RBP11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 CAPN11Q9UMQ6 739 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 AKT3Q9Y243 479 aa11.46□□□□□ -0.57
CHMP1B-202ENST00000588284 ARID2Q68CP9 1835 aa11.46□□□□□ -0.58
CHMP1B-202ENST00000588284 ADGRA3Q8IWK6 1321 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 A0A1W2PQJ5 194 aa11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 GTPBP10A4D1E9 387 aaKnown RBP11.45□□□□□ -0.58
CHMP1B-202ENST00000588284 ZNF233A6NK53 670 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms