RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SKIP12755 728 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 NPEPPSP55786 919 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 POTEGQ6S5H5 508 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 C15orf39Q6ZRI6 1047 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 CCDC149Q6ZUS6 474 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 PPFIBP1Q86W92 1011 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 CCDC105Q8IYK2 499 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 SMG8Q8ND04 991 aaKnown RBP15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 CMASQ8NFW8 434 aaPredicted RBP15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 GBP3Q9H0R5 595 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 DHX33Q9H6R0 707 aaKnown RBP15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 KCNK12Q9HB15 430 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 KCNMB3Q9NPA1 279 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 DOCK8Q8NF50 2099 aa15.48■□□□□ 0.07
CLPTM1-208ENST00000588274 F8W810 466 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 PSMC5P62195 406 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 CCT2P78371 535 aaKnown RBP15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 FGD1P98174 961 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 DSC1Q08554 894 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 PPP2R5CQ13362 524 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 TDGQ13569 410 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 LETM2Q2VYF4 491 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 TAS1R1Q7RTX1 841 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 CATSPER4Q7RTX7 472 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 TMEM175Q9BSA9 504 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 HERC2P3Q9BVR0 1158 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 RHOBTB2Q9BYZ6 727 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 INO80BQ9C086 356 aaPredicted RBP15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 RSAD1Q9HA92 442 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 COL4A3BPQ9Y5P4 624 aa15.47■□□□□ 0.07
CLPTM1-208ENST00000588274 NRP1O14786 923 aa15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 SOD2P04179 222 aa15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 SSBP05455 408 aaKnown RBP eCLIP15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 NCLP19338 710 aaKnown RBP15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 DNM2P50570 870 aa15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 NLRP5P59047 1200 aa15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 RNASELQ05823 741 aaKnown RBP15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 SPIRE1Q08AE8 756 aa15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 BMS1Q14692 1282 aaKnown RBP15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 OTOP3Q7RTS5 596 aa15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 COLGALT2Q8IYK4 626 aa15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 BLIDQ8IZY5 108 aa15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 PRPF31Q8WWY3 499 aaKnown RBP15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 ZNF707Q96C28 371 aaPredicted RBP15.46■□□□□ 0.07
CLPTM1-208ENST00000588274 CNTNAP2Q9UHC6 1331 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 KRBA1A5PL33 1030 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 DDX11L8A8MPP1 907 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 TEX28O15482 410 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 POMCP01189 267 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 AKAP17AQ02040 695 aaKnown RBP15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 KIAA0319Q5VV43 1072 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 SIX5Q8N196 739 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 FLCNQ8NFG4 579 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 RSAD2Q8WXG1 361 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 HAS1Q92839 578 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 NKD2Q969F2 451 aaPredicted RBP15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 TMEM143Q96AN5 459 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 PGBD4Q96DM1 585 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 RPS6KC1Q96S38 1066 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 EMILIN2Q9BXX0 1053 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 C22orf23Q9BZE7 217 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 MFSD1Q9H3U5 465 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 RXFP1Q9HBX9 757 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 XPNPEP1Q9NQW7 623 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 MAN1C1Q9NR34 630 aa15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 DDX25Q9UHL0 483 aaKnown RBP15.45■□□□□ 0.06
CLPTM1-208ENST00000588274 COL4A3Q01955 1670 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 TSPAN1O60635 241 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 KLRC2P26717 231 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 QARSP47897 775 aaKnown RBP15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 FOXK2Q01167 660 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 LAMTOR4Q0VGL1 99 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 ANGPT1Q15389 498 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 AMHR2Q16671 573 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 INF2Q27J81 1249 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 CENPQQ7L2Z9 268 aaPredicted RBP15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 SRGAP1Q7Z6B7 1085 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 GSTCDQ8NEC7 633 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 URGCPQ8TCY9 931 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 ACSF2Q96CM8 615 aaPredicted RBP15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 EIF2AQ9BY44 585 aaKnown RBP15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 RNF39Q9H2S5 420 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 WDR6Q9NNW5 1121 aaKnown RBP15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 MRPL17Q9NRX2 175 aaKnown RBP15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 EPS15L1Q9UBC2 864 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 STK39Q9UEW8 545 aa15.44■□□□□ 0.06
CLPTM1-208ENST00000588274 CLUHO75153 1309 aa15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 RFPL2O75678 378 aa15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 NONOQ15233 471 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 FERMT3Q86UX7 667 aa15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 FAM177A1Q8N128 213 aaPredicted RBP15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 ADSSL1Q8N142 457 aa15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 DTWD2Q8NBA8 298 aa15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 PSPC1Q8WXF1 523 aaKnown RBP15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 SLC7A3Q8WY07 619 aa15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 ZFP42Q96MM3 310 aa15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 MYADMQ96S97 322 aa15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 JPH2Q9BR39 696 aaPredicted RBP15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 PHF20Q9BVI0 1012 aa15.43■□□□□ 0.06
CLPTM1-208ENST00000588274 ZSWIM6Q9HCJ5 1215 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms