RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 MRPL43Q8N983 215 aaKnown RBP20.93■□□□□ 0.94
TRIM47-205ENST00000587774 PGBD4Q96DM1 585 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 MTMR9Q96QG7 549 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 HSD17B14Q9BPX1 270 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 GBP3Q9H0R5 595 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 ZBP1Q9H171 429 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 S1PR5Q9H228 398 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 VWA8A3KMH1 1905 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 ZDBF2Q9HCK1 2354 aa20.93■□□□□ 0.94
TRIM47-205ENST00000587774 POTEMA6NI47 508 aa20.92■□□□□ 0.94
TRIM47-205ENST00000587774 ASAP2O43150 1006 aa20.92■□□□□ 0.94
TRIM47-205ENST00000587774 LYPLA2O95372 231 aa20.92■□□□□ 0.94
TRIM47-205ENST00000587774 GUCY1B3Q02153 619 aa20.92■□□□□ 0.94
TRIM47-205ENST00000587774 CBX2Q14781 532 aaPredicted RBP20.92■□□□□ 0.94
TRIM47-205ENST00000587774 VPS52Q8N1B4 723 aa20.92■□□□□ 0.94
TRIM47-205ENST00000587774 AUTS2Q8WXX7 1259 aa20.92■□□□□ 0.94
TRIM47-205ENST00000587774 IGSF21Q96ID5 467 aa20.92■□□□□ 0.94
TRIM47-205ENST00000587774 RPGRIP1Q96KN7 1286 aa20.92■□□□□ 0.94
TRIM47-205ENST00000587774 RSAD1Q9HA92 442 aa20.92■□□□□ 0.94
TRIM47-205ENST00000587774 CDH22Q9UJ99 828 aa20.92■□□□□ 0.94
TRIM47-205ENST00000587774 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.91■□□□□ 0.94
TRIM47-205ENST00000587774 TSPAN1O60635 241 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 ERLIN2O94905 339 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 GALTP07902 379 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 SLC11A1P49279 550 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 AFF1P51825 1210 aaKnown RBP20.91■□□□□ 0.94
TRIM47-205ENST00000587774 MXD4Q14582 209 aaPredicted RBP20.91■□□□□ 0.94
TRIM47-205ENST00000587774 MRPL10Q7Z7H8 261 aaKnown RBP20.91■□□□□ 0.94
TRIM47-205ENST00000587774 ZNF280BQ86YH2 543 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 DOCK8Q8NF50 2099 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 URGCPQ8TCY9 931 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 ASAP3Q8TDY4 903 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 CASP10Q92851 521 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 TMEM60Q9H2L4 133 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 ANKEF1Q9NU02 776 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 CNTNAP2Q9UHC6 1331 aa20.91■□□□□ 0.94
TRIM47-205ENST00000587774 DOCK6Q96HP0 2047 aa20.9■□□□□ 0.94
TRIM47-205ENST00000587774 CARNS1A5YM72 827 aa20.9■□□□□ 0.94
TRIM47-205ENST00000587774 CLASP2O75122 1294 aaKnown RBP20.9■□□□□ 0.94
TRIM47-205ENST00000587774 DGAT1O75907 488 aa20.9■□□□□ 0.94
TRIM47-205ENST00000587774 HOXB8P17481 243 aaPredicted RBP20.9■□□□□ 0.94
TRIM47-205ENST00000587774 RARRES1P49788 294 aa20.9■□□□□ 0.94
TRIM47-205ENST00000587774 PTENP60484 403 aa20.9■□□□□ 0.94
TRIM47-205ENST00000587774 CAPSQ13938 189 aa20.9■□□□□ 0.94
TRIM47-205ENST00000587774 HFE2Q6ZVN8 426 aa20.9■□□□□ 0.94
TRIM47-205ENST00000587774 DDX53Q86TM3 631 aaKnown RBP20.9■□□□□ 0.94
TRIM47-205ENST00000587774 CCDC83Q8IWF9 413 aa20.9■□□□□ 0.94
TRIM47-205ENST00000587774 PIGOQ8TEQ8 1089 aa20.9■□□□□ 0.94
TRIM47-205ENST00000587774 CCDC43Q96MW1 224 aaKnown RBP20.9■□□□□ 0.94
TRIM47-205ENST00000587774 VN1R3Q9BXE9 311 aa20.9■□□□□ 0.94
TRIM47-205ENST00000587774 DDHD2O94830 711 aa20.89■□□□□ 0.93
TRIM47-205ENST00000587774 CXCL14O95715 111 aa20.89■□□□□ 0.93
TRIM47-205ENST00000587774 CTSAP10619 480 aa20.89■□□□□ 0.93
TRIM47-205ENST00000587774 NCLP19338 710 aaKnown RBP20.89■□□□□ 0.93
TRIM47-205ENST00000587774 ATP2B1P20020 1258 aa20.89■□□□□ 0.93
TRIM47-205ENST00000587774 MCM7P33993 719 aa20.89■□□□□ 0.93
TRIM47-205ENST00000587774 MBTD1Q05BQ5 628 aa20.89■□□□□ 0.93
TRIM47-205ENST00000587774 TFDP1Q14186 410 aa20.89■□□□□ 0.93
TRIM47-205ENST00000587774 BMS1Q14692 1282 aaKnown RBP20.89■□□□□ 0.93
TRIM47-205ENST00000587774 IFNLR1Q8IU57 520 aaPredicted RBP20.89■□□□□ 0.93
TRIM47-205ENST00000587774 SMG8Q8ND04 991 aaKnown RBP20.89■□□□□ 0.93
TRIM47-205ENST00000587774 EDAQ92838 391 aa20.89■□□□□ 0.93
TRIM47-205ENST00000587774 CPB2Q96IY4 423 aa20.89■□□□□ 0.93
TRIM47-205ENST00000587774 EIF2AQ9BY44 585 aaKnown RBP20.89■□□□□ 0.93
TRIM47-205ENST00000587774 LIMCH1Q9UPQ0 1083 aa20.89■□□□□ 0.93
TRIM47-205ENST00000587774 A0A087WWV3 80 aa20.88■□□□□ 0.93
TRIM47-205ENST00000587774 INO80B-WBP1J3KQ70 363 aa20.88■□□□□ 0.93
TRIM47-205ENST00000587774 POMCP01189 267 aa20.88■□□□□ 0.93
TRIM47-205ENST00000587774 SP100P23497 879 aaPredicted RBP20.88■□□□□ 0.93
TRIM47-205ENST00000587774 ARL2P36404 184 aa20.88■□□□□ 0.93
TRIM47-205ENST00000587774 PCBP1Q15365 356 aaKnown RBP eCLIP20.88■□□□□ 0.93
TRIM47-205ENST00000587774 SAFBQ15424 915 aaKnown RBP eCLIP20.88■□□□□ 0.93
TRIM47-205ENST00000587774 NOTUMQ6P988 496 aa20.88■□□□□ 0.93
TRIM47-205ENST00000587774 IPPQ9Y573 584 aa20.88■□□□□ 0.93
TRIM47-205ENST00000587774 IRAK3Q9Y616 596 aa20.88■□□□□ 0.93
TRIM47-205ENST00000587774 USO1O60763 962 aaKnown RBP20.87■□□□□ 0.93
TRIM47-205ENST00000587774 SPATA31C1P0DKV0 1188 aa20.87■□□□□ 0.93
TRIM47-205ENST00000587774 GLRA2P23416 452 aa20.87■□□□□ 0.93
TRIM47-205ENST00000587774 AXLP30530 894 aa20.87■□□□□ 0.93
TRIM47-205ENST00000587774 AMHR2Q16671 573 aa20.87■□□□□ 0.93
TRIM47-205ENST00000587774 TPRNQ4KMQ1 711 aa20.87■□□□□ 0.93
TRIM47-205ENST00000587774 CNNM3Q8NE01 707 aa20.87■□□□□ 0.93
TRIM47-205ENST00000587774 CCDC51Q96ER9 411 aa20.87■□□□□ 0.93
TRIM47-205ENST00000587774 C8orf76Q96K31 380 aa20.87■□□□□ 0.93
TRIM47-205ENST00000587774 POLR3FQ9H1D9 316 aaPredicted RBP20.87■□□□□ 0.93
TRIM47-205ENST00000587774 HES2Q9Y543 173 aa20.87■□□□□ 0.93
TRIM47-205ENST00000587774 PIEZO1Q92508 2521 aa20.87■□□□□ 0.93
TRIM47-205ENST00000587774 ITGA4P13612 1032 aa20.86■□□□□ 0.93
TRIM47-205ENST00000587774 EPCAMP16422 314 aa20.86■□□□□ 0.93
TRIM47-205ENST00000587774 ARF4P18085 180 aaPredicted RBP20.86■□□□□ 0.93
TRIM47-205ENST00000587774 MLH1P40692 756 aa20.86■□□□□ 0.93
TRIM47-205ENST00000587774 POU5F1BQ06416 359 aa20.86■□□□□ 0.93
TRIM47-205ENST00000587774 GIT2Q14161 759 aa20.86■□□□□ 0.93
TRIM47-205ENST00000587774 PTPN14Q15678 1187 aa20.86■□□□□ 0.93
TRIM47-205ENST00000587774 FAM193BQ96PV7 902 aaPredicted RBP20.86■□□□□ 0.93
TRIM47-205ENST00000587774 LLPHQ9BRT6 129 aaKnown RBP20.86■□□□□ 0.93
TRIM47-205ENST00000587774 TMEM175Q9BSA9 504 aa20.86■□□□□ 0.93
TRIM47-205ENST00000587774 NFKBIZQ9BYH8 718 aa20.86■□□□□ 0.93
TRIM47-205ENST00000587774 CSRNP2Q9H175 543 aa20.86■□□□□ 0.93
TRIM47-205ENST00000587774 POMKQ9H5K3 350 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms