RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 ZC3H11AO75152 810 aaKnown RBP eCLIP19.62■□□□□ 0.73
TPM4-206ENST00000587201 NDUFV1P49821 464 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 BCAR1P56945 870 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 RNASELQ05823 741 aaKnown RBP19.62■□□□□ 0.73
TPM4-206ENST00000587201 DLX2Q07687 328 aaPredicted RBP19.62■□□□□ 0.73
TPM4-206ENST00000587201 ADAM15Q13444 863 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 CLUL1Q15846 466 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 ECM1Q16610 540 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 PLPP4Q5VZY2 271 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 LARP1BQ659C4 914 aaKnown RBP19.62■□□□□ 0.73
TPM4-206ENST00000587201 NOTUMQ6P988 496 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 DTHD1Q6ZMT9 781 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 AGMOQ6ZNB7 445 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 SLC39A11Q8N1S5 342 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 IGSF22Q8N9C0 903 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 CNNM3Q8NE01 707 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 URGCPQ8TCY9 931 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 CCDC51Q96ER9 411 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 TCF25Q9BQ70 676 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 RSAD1Q9HA92 442 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 ENTPD7Q9NQZ7 604 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 TBC1D13Q9NVG8 400 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 KIAA1024Q9UPX6 916 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 FAM50BQ9Y247 325 aa19.62■□□□□ 0.73
TPM4-206ENST00000587201 CNTNAP2Q9UHC6 1331 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 FSCN2O14926 492 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 PER2O15055 1255 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 TBX10O75333 385 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 ITGA4P13612 1032 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 CYP11B2P19099 503 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 NCLP19338 710 aaKnown RBP19.61■□□□□ 0.73
TPM4-206ENST00000587201 PRPHP41219 470 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 AMHR2Q16671 573 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 KRT79Q5XKE5 535 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 EFHBQ8N7U6 833 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 EIF2AQ9BY44 585 aaKnown RBP19.61■□□□□ 0.73
TPM4-206ENST00000587201 BACH2Q9BYV9 841 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 GBP3Q9H0R5 595 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 BHMT2Q9H2M3 363 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 NRDE2Q9H7Z3 1164 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 DDX19AQ9NUU7 478 aaKnown RBP19.61■□□□□ 0.73
TPM4-206ENST00000587201 IPPQ9Y573 584 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 MUC3AQ02505 3323 aa19.61■□□□□ 0.73
TPM4-206ENST00000587201 CARNS1A5YM72 827 aa19.6■□□□□ 0.73
TPM4-206ENST00000587201 ARF4P18085 180 aaPredicted RBP19.6■□□□□ 0.73
TPM4-206ENST00000587201 IL17AQ16552 155 aa19.6■□□□□ 0.73
TPM4-206ENST00000587201 TMC7Q7Z402 723 aa19.6■□□□□ 0.73
TPM4-206ENST00000587201 ZBTB8OSQ8IWT0 167 aa19.6■□□□□ 0.73
TPM4-206ENST00000587201 SMG8Q8ND04 991 aaKnown RBP19.6■□□□□ 0.73
TPM4-206ENST00000587201 TMEM169Q96HH4 297 aa19.6■□□□□ 0.73
TPM4-206ENST00000587201 TRIM6Q9C030 488 aaPredicted RBP19.6■□□□□ 0.73
TPM4-206ENST00000587201 CSRNP2Q9H175 543 aa19.6■□□□□ 0.73
TPM4-206ENST00000587201 NGRNQ9NPE2 291 aaKnown RBP19.6■□□□□ 0.73
TPM4-206ENST00000587201 PP2D1A8MPX8 630 aa19.59■□□□□ 0.73
TPM4-206ENST00000587201 B4GALT5O43286 388 aa19.59■□□□□ 0.73
TPM4-206ENST00000587201 CDC25AP30304 524 aa19.59■□□□□ 0.73
TPM4-206ENST00000587201 ATP2C1P98194 919 aaPredicted RBP19.59■□□□□ 0.73
TPM4-206ENST00000587201 FAM178BQ8IXR5 827 aa19.59■□□□□ 0.73
TPM4-206ENST00000587201 FAM193BQ96PV7 902 aaPredicted RBP19.59■□□□□ 0.73
TPM4-206ENST00000587201 CDCA3Q99618 268 aaPredicted RBP19.59■□□□□ 0.73
TPM4-206ENST00000587201 C2orf40Q9H1Z8 148 aa19.59■□□□□ 0.73
TPM4-206ENST00000587201 UBN1Q9NPG3 1134 aa19.59■□□□□ 0.73
TPM4-206ENST00000587201 PRMT7Q9NVM4 692 aaPredicted RBP19.59■□□□□ 0.73
TPM4-206ENST00000587201 KANSL3Q9P2N6 904 aa19.59■□□□□ 0.73
TPM4-206ENST00000587201 CD207Q9UJ71 328 aa19.59■□□□□ 0.73
TPM4-206ENST00000587201 FSD2A1L4K1 749 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 GALTP07902 379 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 CA8P35219 290 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 DUSP6Q16828 381 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 CDCA2Q69YH5 1023 aaPredicted RBP19.58■□□□□ 0.72
TPM4-206ENST00000587201 CDR2LQ86X02 465 aaPredicted RBP19.58■□□□□ 0.72
TPM4-206ENST00000587201 ZNF280BQ86YH2 543 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 DEPTORQ8TB45 409 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 BSNDQ8WZ55 320 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 APOL6Q9BWW8 343 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 RNF39Q9H2S5 420 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 POLD4Q9HCU8 107 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 DNAJB4Q9UDY4 337 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 BARX2Q9UMQ3 279 aaPredicted RBP19.58■□□□□ 0.72
TPM4-206ENST00000587201 DNM3Q9UQ16 869 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 HES2Q9Y543 173 aa19.58■□□□□ 0.72
TPM4-206ENST00000587201 HIDE1A8MVS5 230 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 E9PMD0 336 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 MBTPS2O43462 519 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 NPTXRO95502 500 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 POMCP01189 267 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 NAMPTP43490 491 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 SLC11A1P49279 550 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 AFF1P51825 1210 aaKnown RBP19.57■□□□□ 0.72
TPM4-206ENST00000587201 SMAD4Q13485 552 aaKnown RBP19.57■□□□□ 0.72
TPM4-206ENST00000587201 CUL4AQ13619 759 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 BMS1Q14692 1282 aaKnown RBP19.57■□□□□ 0.72
TPM4-206ENST00000587201 PPP2R5AQ15172 486 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 ZRSR1Q15695 479 aaKnown RBP19.57■□□□□ 0.72
TPM4-206ENST00000587201 TMEM132AQ24JP5 1023 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 SLC27A1Q6PCB7 646 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 TMEM173Q86WV6 379 aaPredicted RBP19.57■□□□□ 0.72
TPM4-206ENST00000587201 HACE1Q8IYU2 909 aa19.57■□□□□ 0.72
TPM4-206ENST00000587201 IGSF21Q96ID5 467 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms