RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 ACKR2O00590 384 aa21.1■□□□□ 0.97
DDX39A-204ENST00000586558 ENPP3O14638 875 aa21.1■□□□□ 0.97
DDX39A-204ENST00000586558 GTPBP6O43824 516 aaPredicted RBP21.1■□□□□ 0.97
DDX39A-204ENST00000586558 KINO60870 393 aaKnown RBP21.1■□□□□ 0.97
DDX39A-204ENST00000586558 LIG1P18858 919 aa21.1■□□□□ 0.97
DDX39A-204ENST00000586558 HERC4Q5GLZ8 1057 aaPredicted RBP21.1■□□□□ 0.97
DDX39A-204ENST00000586558 UNC13DQ70J99 1090 aa21.1■□□□□ 0.97
DDX39A-204ENST00000586558 SLC24A5Q71RS6 500 aa21.1■□□□□ 0.97
DDX39A-204ENST00000586558 HAUS6Q7Z4H7 955 aa21.1■□□□□ 0.97
DDX39A-204ENST00000586558 LINC01599Q8WXQ3 324 aa21.1■□□□□ 0.97
DDX39A-204ENST00000586558 ST6GALNAC4Q9H4F1 302 aa21.1■□□□□ 0.97
DDX39A-204ENST00000586558 HOOK1Q9UJC3 728 aaKnown RBP21.1■□□□□ 0.97
DDX39A-204ENST00000586558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.09■□□□□ 0.97
DDX39A-204ENST00000586558 K7ENM7 598 aa21.09■□□□□ 0.97
DDX39A-204ENST00000586558 MGEA5O60502 916 aa21.09■□□□□ 0.97
DDX39A-204ENST00000586558 NR1I2O75469 434 aa21.09■□□□□ 0.97
DDX39A-204ENST00000586558 HOXA11P31270 313 aaPredicted RBP21.09■□□□□ 0.97
DDX39A-204ENST00000586558 STRN3Q13033 797 aa21.09■□□□□ 0.97
DDX39A-204ENST00000586558 PRPF4BQ13523 1007 aaKnown RBP21.09■□□□□ 0.97
DDX39A-204ENST00000586558 CUL4BQ13620 913 aa21.09■□□□□ 0.97
DDX39A-204ENST00000586558 ALCAMQ13740 583 aa21.09■□□□□ 0.97
DDX39A-204ENST00000586558 NOTUMQ6P988 496 aa21.09■□□□□ 0.97
DDX39A-204ENST00000586558 RTN4RL1Q86UN2 441 aaPredicted RBP21.09■□□□□ 0.97
DDX39A-204ENST00000586558 GRAMD1CQ8IYS0 662 aa21.09■□□□□ 0.97
DDX39A-204ENST00000586558 FIZ1Q96SL8 496 aa21.09■□□□□ 0.97
DDX39A-204ENST00000586558 BLZF1Q9H2G9 400 aa21.09■□□□□ 0.97
DDX39A-204ENST00000586558 C9IYK1 514 aa21.08■□□□□ 0.97
DDX39A-204ENST00000586558 ATP2A2P16615 1042 aaKnown RBP21.08■□□□□ 0.97
DDX39A-204ENST00000586558 ARF4P18085 180 aaPredicted RBP21.08■□□□□ 0.97
DDX39A-204ENST00000586558 RAB27AP51159 221 aa21.08■□□□□ 0.97
DDX39A-204ENST00000586558 COASYQ13057 564 aa21.08■□□□□ 0.97
DDX39A-204ENST00000586558 TWF2Q6IBS0 349 aaKnown RBP21.08■□□□□ 0.97
DDX39A-204ENST00000586558 ELOA2Q8IYF1 753 aaPredicted RBP21.08■□□□□ 0.97
DDX39A-204ENST00000586558 HVCN1Q96D96 273 aa21.08■□□□□ 0.97
DDX39A-204ENST00000586558 MRPL44Q9H9J2 332 aaKnown RBP21.08■□□□□ 0.97
DDX39A-204ENST00000586558 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.07■□□□□ 0.96
DDX39A-204ENST00000586558 B4GALT5O43286 388 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 SKIP12755 728 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 SARSP49591 514 aaKnown RBP21.07■□□□□ 0.96
DDX39A-204ENST00000586558 FAM189BP81408 668 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 DEFB103AP81534 67 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 GTF2BQ00403 316 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 POSTNQ15063 836 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.07■□□□□ 0.961e-6■■■■□ 20.8
DDX39A-204ENST00000586558 STXBP4Q6ZWJ1 553 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 TAS1R3Q7RTX0 852 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 ZNF720Q7Z2F6 126 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 MYOCDQ8IZQ8 938 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 MRPL4Q9BYD3 311 aaKnown RBP21.07■□□□□ 0.96
DDX39A-204ENST00000586558 LMBRD1Q9NUN5 540 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 MICAL3Q7RTP6 2002 aa21.07■□□□□ 0.96
DDX39A-204ENST00000586558 A0A0U1RQF3 1178 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 A0A1B0GUA9 196 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 N4BP3O15049 544 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 STAG3L1P0CL83 205 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 CASP1P29466 404 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 NMT1P30419 496 aaKnown RBP21.06■□□□□ 0.96
DDX39A-204ENST00000586558 EHHADHQ08426 723 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 DPYDQ12882 1025 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 TMEM132AQ24JP5 1023 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 FAM26FQ5R3K3 315 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 ZPBP2Q6X784 338 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 APBB1IPQ7Z5R6 666 aaPredicted RBP21.06■□□□□ 0.96
DDX39A-204ENST00000586558 NPAS4Q8IUM7 802 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 TOP1MTQ969P6 601 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 CCDC47Q96A33 483 aaKnown RBP21.06■□□□□ 0.96
DDX39A-204ENST00000586558 ELAC1Q9H777 363 aaKnown RBP21.06■□□□□ 0.96
DDX39A-204ENST00000586558 TBX20Q9UMR3 447 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 PCDHB13Q9Y5F0 798 aa21.06■□□□□ 0.96
DDX39A-204ENST00000586558 RANBP2P49792 3224 aaKnown RBP21.06■□□□□ 0.96
DDX39A-204ENST00000586558 MYH11P35749 1972 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.05■□□□□ 0.96
DDX39A-204ENST00000586558 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.05■□□□□ 0.96
DDX39A-204ENST00000586558 RBAK-RBAKDNI3L0D1 243 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 PPP1R37O75864 691 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 LRIT3Q3SXY7 679 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 ATF7IP2Q5U623 682 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 SLC27A1Q6PCB7 646 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 MAP4K3Q8IVH8 894 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 HERC6Q8IVU3 1022 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 CPB2Q96IY4 423 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 STRA6Q9BX79 667 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 EXOC1Q9NV70 894 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 TMEM161AQ9NX61 479 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 TNFSF13BQ9Y275 285 aa21.05■□□□□ 0.96
DDX39A-204ENST00000586558 KLRC4O43908 158 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 ZNF623O75123 536 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 GJB5O95377 273 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 GCNT3O95395 438 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 RPN1P04843 607 aaKnown RBP21.04■□□□□ 0.96
DDX39A-204ENST00000586558 PRR29P0C7W0 189 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 PSMD2Q13200 908 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 NT5DC1Q5TFE4 455 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 ECHDC2Q86YB7 292 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 CRIPAKQ8N1N5 446 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 ACO2Q99798 780 aaKnown RBP21.04■□□□□ 0.96
DDX39A-204ENST00000586558 ADPGKQ9BRR6 497 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 PDZD7Q9H5P4 517 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 FAM105AQ9NUU6 356 aa21.04■□□□□ 0.96
DDX39A-204ENST00000586558 TBC1D7Q9P0N9 293 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms