RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 CPLX1O14810 134 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 PI15O43692 258 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 GFRA3O60609 400 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 KLRC2P26717 231 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 QARSP47897 775 aaKnown RBP13.01□□□□□ -0.33
LIG3-207ENST00000586119 POLGP54098 1239 aaPredicted RBP13.01□□□□□ -0.33
LIG3-207ENST00000586119 CDC42EP1Q00587 391 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 LAMTOR4Q0VGL1 99 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 SCRN1Q12765 414 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 PPP2R5CQ13362 524 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 MTMR3Q13615 1198 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 CTTNQ14247 550 aaKnown RBP13.01□□□□□ -0.33
LIG3-207ENST00000586119 CABP7Q86V35 215 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 ZDHHC14Q8IZN3 488 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 TDRD5Q8NAT2 981 aaKnown RBP13.01□□□□□ -0.33
LIG3-207ENST00000586119 SMG8Q8ND04 991 aaKnown RBP13.01□□□□□ -0.33
LIG3-207ENST00000586119 ZNF274Q96GC6 653 aaPredicted RBP13.01□□□□□ -0.33
LIG3-207ENST00000586119 DYDC2Q96IM9 177 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 PHF20Q9BVI0 1012 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 EIF2AQ9BY44 585 aaKnown RBP13.01□□□□□ -0.33
LIG3-207ENST00000586119 C22orf23Q9BZE7 217 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 DHX33Q9H6R0 707 aaKnown RBP13.01□□□□□ -0.33
LIG3-207ENST00000586119 KCNMB3Q9NPA1 279 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 FAN1Q9Y2M0 1017 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 HES2Q9Y543 173 aa13.01□□□□□ -0.33
LIG3-207ENST00000586119 GALR2O43603 387 aaPredicted RBP13□□□□□ -0.33
LIG3-207ENST00000586119 ALDH2P05091 517 aa13□□□□□ -0.33
LIG3-207ENST00000586119 SKIP12755 728 aa13□□□□□ -0.33
LIG3-207ENST00000586119 CLCN4P51793 760 aa13□□□□□ -0.33
LIG3-207ENST00000586119 BMS1Q14692 1282 aaKnown RBP13□□□□□ -0.33
LIG3-207ENST00000586119 NCAPH2Q6IBW4 605 aa13□□□□□ -0.33
LIG3-207ENST00000586119 MOXD1Q6UVY6 613 aa13□□□□□ -0.33
LIG3-207ENST00000586119 ASCL5Q7RTU5 278 aa13□□□□□ -0.33
LIG3-207ENST00000586119 GPR149Q86SP6 731 aa13□□□□□ -0.33
LIG3-207ENST00000586119 UBALD2Q8IYN6 164 aa13□□□□□ -0.33
LIG3-207ENST00000586119 PGBD4Q96DM1 585 aa13□□□□□ -0.33
LIG3-207ENST00000586119 CPB2Q96IY4 423 aa13□□□□□ -0.33
LIG3-207ENST00000586119 RSAD1Q9HA92 442 aa13□□□□□ -0.33
LIG3-207ENST00000586119 DZANK1Q9NVP4 752 aa13□□□□□ -0.33
LIG3-207ENST00000586119 MARCH5Q9NX47 278 aa13□□□□□ -0.33
LIG3-207ENST00000586119 PRG3Q9Y2Y8 225 aaPredicted RBP13□□□□□ -0.33
LIG3-207ENST00000586119 CYP46A1Q9Y6A2 500 aa13□□□□□ -0.33
LIG3-207ENST00000586119 TDRD15B5MCY1 1934 aaKnown RBP13□□□□□ -0.33
LIG3-207ENST00000586119 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 ST18O60284 1047 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 CCNT1O60563 726 aaKnown RBP12.99□□□□□ -0.33
LIG3-207ENST00000586119 N4BP1O75113 896 aaKnown RBP12.99□□□□□ -0.33
LIG3-207ENST00000586119 REC8O95072 547 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 CTDNEP1O95476 244 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 P4HBP07237 508 aaKnown RBP12.99□□□□□ -0.33
LIG3-207ENST00000586119 SPATA31D3P0C874 917 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 NPR3P17342 541 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 CYP4A11Q02928 519 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 EPHA7Q15375 998 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 POTEGQ6S5H5 508 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 SPATA31D4Q6ZUB0 917 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 PIK3AP1Q6ZUJ8 805 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 KRT25Q7Z3Z0 450 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 SRGAP1Q7Z6B7 1085 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 FERMT3Q86UX7 667 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 CDR2LQ86X02 465 aaPredicted RBP12.99□□□□□ -0.33
LIG3-207ENST00000586119 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 RNF149Q8NC42 400 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 ST13P5Q8NFI4 369 aaPredicted RBP12.99□□□□□ -0.33
LIG3-207ENST00000586119 RSAD2Q8WXG1 361 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 RABGGTAQ92696 567 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 B3GALT6Q96L58 329 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 FAM193BQ96PV7 902 aaPredicted RBP12.99□□□□□ -0.33
LIG3-207ENST00000586119 GAD1Q99259 594 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 LXNQ9BS40 222 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 XPNPEP1Q9NQW7 623 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 DOCK8Q8NF50 2099 aa12.99□□□□□ -0.33
LIG3-207ENST00000586119 MTCL1Q9Y4B5 1905 aaKnown RBP12.99□□□□□ -0.33
LIG3-207ENST00000586119 CFAP54Q96N23 3096 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 MYO15AQ9UKN7 3530 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 CCDC194A0A1B0GVG4 234 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 WNT7AO00755 349 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 NARSO43776 548 aaKnown RBP12.98□□□□□ -0.33
LIG3-207ENST00000586119 NCLP19338 710 aaKnown RBP12.98□□□□□ -0.33
LIG3-207ENST00000586119 YWHABP31946 246 aaKnown RBP12.98□□□□□ -0.33
LIG3-207ENST00000586119 OR1G1P47890 313 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 RAB27AP51159 221 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 SPIRE1Q08AE8 756 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 GIT2Q14161 759 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 EMC2Q15006 297 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 XKR9Q5GH70 373 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 CWF19L1Q69YN2 538 aaKnown RBP12.98□□□□□ -0.33
LIG3-207ENST00000586119 ASTLQ6HA08 431 aaPredicted RBP12.98□□□□□ -0.33
LIG3-207ENST00000586119 GALNT17Q6IS24 598 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 NEK8Q86SG6 692 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 C4orf19Q8IY42 314 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 COLGALT2Q8IYK4 626 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 FLCNQ8NFG4 579 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 URGCPQ8TCY9 931 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 ASAP3Q8TDY4 903 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 PSPC1Q8WXF1 523 aaKnown RBP12.98□□□□□ -0.33
LIG3-207ENST00000586119 SLC7A3Q8WY07 619 aa12.98□□□□□ -0.33
LIG3-207ENST00000586119 FAM20AQ96MK3 541 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms