RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 PRR29P0C7W0 189 aa16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 PNOCQ13519 176 aa16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 TMEM240Q5SV17 173 aa16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 NOTUMQ6P988 496 aa16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 BICD1Q96G01 975 aa16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 MRPL4Q9BYD3 311 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 CCDC113Q9H0I3 377 aa16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 FZD8Q9H461 694 aa16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 C1orf112Q9NSG2 853 aa16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 TBC1D7Q9P0N9 293 aa16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 EXOC7Q9UPT5 735 aa16.04■□□□□ 0.16
SCAMP4-209ENST00000585335 CNTNAP2Q9UHC6 1331 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 N4BP3O15049 544 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 TSPAN1O60635 241 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 KIF20AO95235 890 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 AMHP03971 560 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 SKIP12755 728 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 NMT1P30419 496 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 BMP8BP34820 402 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 KCNB1Q14721 858 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 KMT5BQ4FZB7 885 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 OTOP2Q7RTS6 562 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 ZNF720Q7Z2F6 126 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 HERVK_113Q902F9 699 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 KCNN1Q92952 543 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 GSDMAQ96QA5 445 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 ADAM2Q99965 735 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 ADPGKQ9BRR6 497 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 OSBPL7Q9BZF2 842 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 NUP62CLQ9H1M0 184 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 CLSTN2Q9H4D0 955 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 TBX20Q9UMR3 447 aa16.03■□□□□ 0.16
SCAMP4-209ENST00000585335 UBE4BO95155 1302 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 KLRC4O43908 158 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 LIG4P49917 911 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 RAB27AP51159 221 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 EPHB4P54760 987 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 GTF2BQ00403 316 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 C16orf59Q7L2K0 433 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 HACE1Q8IYU2 909 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 SYAP1Q96A49 352 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 RNPC3Q96LT9 517 aaKnown RBP16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 ACCSQ96QU6 501 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 TRIM6Q9C030 488 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 TSPYL2Q9H2G4 693 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 TMX1Q9H3N1 280 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 TMEM206Q9H813 350 aa16.02■□□□□ 0.16
SCAMP4-209ENST00000585335 HNRNPDLO14979 420 aaKnown RBP16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 EIF3DO15371 548 aaKnown RBP eCLIP16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 RHOBTB3O94955 611 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 ARF4P18085 180 aaPredicted RBP16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 CAMK4Q16566 473 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 AMHR2Q16671 573 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 L1TD1Q5T7N2 865 aaKnown RBP16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 ATF7IP2Q5U623 682 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 PRPF38BQ5VTL8 546 aaKnown RBP16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 SLC27A1Q6PCB7 646 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 ZPBP2Q6X784 338 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 SLC24A5Q71RS6 500 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 MAP4K3Q8IVH8 894 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 SYCP3Q8IZU3 236 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 GPT2Q8TD30 523 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 VWCEQ96DN2 955 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 FIZ1Q96SL8 496 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 SLC39A2Q9NP94 309 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 RGS18Q9NS28 235 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 LRFN2Q9ULH4 789 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 PCDHA5Q9Y5H7 936 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 SLC4A7Q9Y6M7 1214 aa16.01■□□□□ 0.15
SCAMP4-209ENST00000585335 PDE4DIPQ5VU43 2346 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 A0A1B0GUA9 196 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 ENPP3O14638 875 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 B4GALT5O43286 388 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 STAG3L1P0CL83 205 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 MYBP10242 640 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 MATR3P43243 847 aaKnown RBP eCLIP16■□□□□ 0.15
SCAMP4-209ENST00000585335 WDR5P61964 334 aaKnown RBP16■□□□□ 0.15
SCAMP4-209ENST00000585335 EHHADHQ08426 723 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 DSC3Q14574 896 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 DCAF4L1Q3SXM0 396 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 ZC2HC1CQ53FD0 456 aaPredicted RBP16■□□□□ 0.15
SCAMP4-209ENST00000585335 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 CPB2Q96IY4 423 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 SLC9A7Q96T83 725 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 TCHPQ9BT92 498 aa16■□□□□ 0.15
SCAMP4-209ENST00000585335 MGEA5O60502 916 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 TOM1L1O75674 476 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 PPP1R37O75864 691 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 HOXA11P31270 313 aaPredicted RBP15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 SARSP49591 514 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 SHHQ15465 462 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 TCTN1Q2MV58 587 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 SKOR2Q2VWA4 1001 aaPredicted RBP15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 NT5DC1Q5TFE4 455 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 SLFN12LQ6IEE8 588 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 TAS1R3Q7RTX0 852 aa15.99■□□□□ 0.15
SCAMP4-209ENST00000585335 TDHQ8IZJ6 230 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms