RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ZBTB33Q86T24 672 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 ZDHHC14Q8IZN3 488 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 SLC22A17Q8WUG5 538 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 LPPQ93052 612 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 APOL5Q9BWW9 433 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 POMKQ9H5K3 350 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 SORCS3Q9UPU3 1222 aa16.77■□□□□ 0.28
VAPA-209ENST00000585042 SRGAP2CP0DJJ0 459 aa16.76■□□□□ 0.27
VAPA-209ENST00000585042 AVPR2P30518 371 aa16.76■□□□□ 0.27
VAPA-209ENST00000585042 YWHABP31946 246 aaKnown RBP16.76■□□□□ 0.27
VAPA-209ENST00000585042 ANAPC15P60006 121 aa16.76■□□□□ 0.27
VAPA-209ENST00000585042 NCBP1Q09161 790 aaKnown RBP16.76■□□□□ 0.27
VAPA-209ENST00000585042 MTMR3Q13615 1198 aa16.76■□□□□ 0.27
VAPA-209ENST00000585042 MXD4Q14582 209 aaPredicted RBP16.76■□□□□ 0.27
VAPA-209ENST00000585042 IER5LQ5T953 404 aa16.76■□□□□ 0.27
VAPA-209ENST00000585042 PRSS33Q8NF86 280 aa16.76■□□□□ 0.27
VAPA-209ENST00000585042 EMILIN2Q9BXX0 1053 aa16.76■□□□□ 0.27
VAPA-209ENST00000585042 RSAD1Q9HA92 442 aa16.76■□□□□ 0.27
VAPA-209ENST00000585042 SSX2IPQ9Y2D8 614 aa16.76■□□□□ 0.27
VAPA-209ENST00000585042 INPPL1O15357 1258 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 LYPLA2O95372 231 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 NCLP19338 710 aaKnown RBP16.75■□□□□ 0.27
VAPA-209ENST00000585042 CA8P35219 290 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 SLC11A1P49279 550 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 PIK3AP1Q6ZUJ8 805 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 FERMT3Q86UX7 667 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 TMEM173Q86WV6 379 aaPredicted RBP16.75■□□□□ 0.27
VAPA-209ENST00000585042 ZNF280BQ86YH2 543 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 ZNF579Q8NAF0 562 aaKnown RBP16.75■□□□□ 0.27
VAPA-209ENST00000585042 KREMEN2Q8NCW0 462 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 TMEM143Q96AN5 459 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 CCDC51Q96ER9 411 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 FAM193BQ96PV7 902 aaPredicted RBP16.75■□□□□ 0.27
VAPA-209ENST00000585042 LXNQ9BS40 222 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 WRAP73Q9P2S5 460 aaPredicted RBP16.75■□□□□ 0.27
VAPA-209ENST00000585042 DNAJB4Q9UDY4 337 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 INPP5FQ9Y2H2 1132 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 FAN1Q9Y2M0 1017 aa16.75■□□□□ 0.27
VAPA-209ENST00000585042 MEIS3P2A8K0S8 358 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 C2CD4DB7Z1M9 353 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 LILRB3O75022 631 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 SLITRK3O94933 977 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 SPIRE1Q08AE8 756 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 EMC2Q15006 297 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 PTPN14Q15678 1187 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 LONRF3Q496Y0 759 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 XKR9Q5GH70 373 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 UBXN11Q5T124 520 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 RARS2Q5T160 578 aaKnown RBP16.74■□□□□ 0.27
VAPA-209ENST00000585042 CABP7Q86V35 215 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 IFNLR1Q8IU57 520 aaPredicted RBP16.74■□□□□ 0.27
VAPA-209ENST00000585042 RNF149Q8NC42 400 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 MTRQ99707 1265 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 MINDY3Q9H8M7 445 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 BRMS1Q9HCU9 246 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 TSHZ2Q9NRE2 1034 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 ANKEF1Q9NU02 776 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 RGL1Q9NZL6 768 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 ORC3Q9UBD5 711 aaPredicted RBP16.74■□□□□ 0.27
VAPA-209ENST00000585042 TPCN1Q9ULQ1 816 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 PCDHA12Q9UN75 941 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 ZDBF2Q9HCK1 2354 aa16.74■□□□□ 0.27
VAPA-209ENST00000585042 MYO10Q9HD67 2058 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 DDHD2O94830 711 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 ERLIN2O94905 339 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 C1RP00736 705 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 XRCC6P12956 609 aaKnown RBP eCLIP16.73■□□□□ 0.278e-6■■□□□ 12.6
VAPA-209ENST00000585042 EPCAMP16422 314 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 PTENP60484 403 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 TCF15Q12870 199 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 TFDP1Q14186 410 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 CYP26C1Q6V0L0 522 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 C15orf39Q6ZRI6 1047 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 GPR149Q86SP6 731 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 TDRD5Q8NAT2 981 aaKnown RBP16.73■□□□□ 0.27
VAPA-209ENST00000585042 OXER1Q8TDS5 423 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 BCL7CQ8WUZ0 217 aaPredicted RBP16.73■□□□□ 0.27
VAPA-209ENST00000585042 AUTS2Q8WXX7 1259 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 DYDC2Q96IM9 177 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 KLHL5Q96PQ7 755 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 HSD17B14Q9BPX1 270 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 NFKBIZQ9BYH8 718 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 GBP3Q9H0R5 595 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 SFXN1Q9H9B4 322 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 MRPL17Q9NRX2 175 aaKnown RBP16.73■□□□□ 0.27
VAPA-209ENST00000585042 DPP7Q9UHL4 492 aa16.73■□□□□ 0.27
VAPA-209ENST00000585042 DBR1Q9UK59 544 aaKnown RBP16.73■□□□□ 0.27
VAPA-209ENST00000585042 NRP1O14786 923 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 CTDNEP1O95476 244 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 ITGA4P13612 1032 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 KLRC2P26717 231 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 KRT2P35908 639 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 CLCN4P51793 760 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 NCAPH2Q6IBW4 605 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 NOTUMQ6P988 496 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 ELMSAN1Q6PJG2 1045 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 TPH2Q8IWU9 490 aa16.72■□□□□ 0.27
VAPA-209ENST00000585042 C12orf76Q8N812 135 aaPredicted RBP16.72■□□□□ 0.27
VAPA-209ENST00000585042 ACSF2Q96CM8 615 aaPredicted RBP16.72■□□□□ 0.27
VAPA-209ENST00000585042 VN1R3Q9BXE9 311 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms