RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.65■□□□□ 0.58
TSEN54-211ENST00000583818 ZBTB8OSQ8IWT0 167 aa18.65■□□□□ 0.58
TSEN54-211ENST00000583818 SYT2Q8N9I0 419 aaPredicted RBP18.65■□□□□ 0.58
TSEN54-211ENST00000583818 SMG8Q8ND04 991 aaKnown RBP18.65■□□□□ 0.58
TSEN54-211ENST00000583818 SYMPKQ92797 1274 aaKnown RBP18.65■□□□□ 0.58
TSEN54-211ENST00000583818 KIFAP3Q92845 792 aa18.65■□□□□ 0.58
TSEN54-211ENST00000583818 CALML4Q96GE6 196 aa18.65■□□□□ 0.58
TSEN54-211ENST00000583818 IFT74Q96LB3 600 aa18.65■□□□□ 0.58
TSEN54-211ENST00000583818 C11orf84Q9BUA3 381 aaPredicted RBP18.65■□□□□ 0.58
TSEN54-211ENST00000583818 TRAIPQ9BWF2 469 aa18.65■□□□□ 0.58
TSEN54-211ENST00000583818 NFKBIZQ9BYH8 718 aa18.65■□□□□ 0.58
TSEN54-211ENST00000583818 RNF39Q9H2S5 420 aa18.65■□□□□ 0.58
TSEN54-211ENST00000583818 RNF216Q9NWF9 866 aaPredicted RBP18.65■□□□□ 0.58
TSEN54-211ENST00000583818 RWDD3Q9Y3V2 267 aa18.65■□□□□ 0.58
TSEN54-211ENST00000583818 PLXNA4Q9HCM2 1894 aa18.65■□□□□ 0.58
TSEN54-211ENST00000583818 CCDC169A6NNP5 214 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 HOXA2O43364 376 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 NPTXRO95502 500 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 F13A1P00488 732 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 PRKCBP05771 671 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 RAB27AP51159 221 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 MCM6Q14566 821 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 SLC39A14Q15043 492 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 NOTUMQ6P988 496 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 COLGALT1Q8NBJ5 622 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 CHAMP1Q96JM3 812 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 NXF3Q9H4D5 531 aaKnown RBP18.64■□□□□ 0.57
TSEN54-211ENST00000583818 BLOC1S4Q9NUP1 217 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 PLAGL2Q9UPG8 496 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 IPPQ9Y573 584 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 PCDHGC5Q9Y5F6 944 aa18.64■□□□□ 0.57
TSEN54-211ENST00000583818 SRPRBQ9Y5M8 271 aaKnown RBP18.64■□□□□ 0.57
TSEN54-211ENST00000583818 B4GALT3O60512 393 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 ZNF623O75123 536 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 OFD1O75665 1012 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 RB1P06400 928 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 NPTX2P47972 431 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 STK38Q15208 465 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 TMEM132AQ24JP5 1023 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 ARSHQ5FYA8 562 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 GPBP1Q86WP2 473 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 LRRC43Q8N309 656 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 MRPL38Q96DV4 380 aaKnown RBP18.63■□□□□ 0.57
TSEN54-211ENST00000583818 CCDC113Q9H0I3 377 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 GBP3Q9H0R5 595 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 C2orf40Q9H1Z8 148 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 FZD8Q9H461 694 aa18.63■□□□□ 0.57
TSEN54-211ENST00000583818 PRMT7Q9NVM4 692 aaPredicted RBP18.63■□□□□ 0.57
TSEN54-211ENST00000583818 SPTBN5Q9NRC6 3674 aaKnown RBP18.62■□□□□ 0.57
TSEN54-211ENST00000583818 NT5C1B-RDH14C9J2C7 533 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 SKIP12755 728 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 AXLP30530 894 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 IRS1P35568 1242 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 NASPP49321 788 aaPredicted RBP18.62■□□□□ 0.57
TSEN54-211ENST00000583818 TFF2Q03403 129 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 NCBP1Q09161 790 aaKnown RBP18.62■□□□□ 0.57
TSEN54-211ENST00000583818 PRPF4BQ13523 1007 aaKnown RBP18.62■□□□□ 0.57
TSEN54-211ENST00000583818 CAMK1Q14012 370 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 PPP2R5AQ15172 486 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 EEF1DP3Q658K8 133 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 GLB1LQ6UWU2 654 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 MRPL10Q7Z7H8 261 aaKnown RBP18.62■□□□□ 0.57
TSEN54-211ENST00000583818 THNSL1Q8IYQ7 743 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 LINC00301Q8NCQ3 95 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 SPPL3Q8TCT6 385 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 RAD54LQ92698 747 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 PLVAPQ9BX97 442 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 PANK2Q9BZ23 570 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 PDZD7Q9H5P4 517 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 TBC1D13Q9NVG8 400 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 PCDHB12Q9Y5F1 795 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 VCANP13611 3396 aa18.62■□□□□ 0.57
TSEN54-211ENST00000583818 CNTNAP2Q9UHC6 1331 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 SLC16A4O15374 487 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 ZC3H11AO75152 810 aaKnown RBP eCLIP18.61■□□□□ 0.57
TSEN54-211ENST00000583818 FGF18O76093 207 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 POMCP01189 267 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 ITGA4P13612 1032 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 NCLP19338 710 aaKnown RBP18.61■□□□□ 0.57
TSEN54-211ENST00000583818 AKAP5P24588 427 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 GUCY2CP25092 1073 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 PCBP1Q15365 356 aaKnown RBP eCLIP18.61■□□□□ 0.57
TSEN54-211ENST00000583818 MAPK6Q16659 721 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 PTPROQ16827 1216 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 TCEAL5Q5H9L2 206 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 NOMO2Q5JPE7 1267 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 KCNT2Q6UVM3 1135 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 KRI1Q8N9T8 703 aaKnown RBP18.61■□□□□ 0.57
TSEN54-211ENST00000583818 POF1BQ8WVV4 589 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 P2RX5Q93086 422 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 PGBD4Q96DM1 585 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 DRC1Q96MC2 740 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 ZNF396Q96N95 335 aaPredicted RBP18.61■□□□□ 0.57
TSEN54-211ENST00000583818 TRIM6Q9C030 488 aaPredicted RBP18.61■□□□□ 0.57
TSEN54-211ENST00000583818 CCSER1Q9C0I3 900 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 RSAD1Q9HA92 442 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 KMT5AQ9NQR1 393 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 LMCD1Q9NZU5 365 aa18.61■□□□□ 0.57
TSEN54-211ENST00000583818 MYH11P35749 1972 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms