RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ANO5Q75V66 913 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 ETNPPLQ8TBG4 499 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 MBOAT7Q96N66 472 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 TMEM175Q9BSA9 504 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 IFT122Q9HBG6 1241 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 NCOA5Q9HCD5 579 aaKnown RBP15.2■□□□□ 0.02
SS18-222ENST00000582792 PCDHA4Q9UN74 947 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 DUSP12Q9UNI6 340 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 DMXL1Q9Y485 3027 aa15.2■□□□□ 0.02
SS18-222ENST00000582792 GVINP1Q7Z2Y8 2422 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 M0R2N6 131 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 PI15O43692 258 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 ALDH2P05091 517 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 SSBP05455 408 aaKnown RBP eCLIP15.19■□□□□ 0.02
SS18-222ENST00000582792 NPR3P17342 541 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 PDIA3P30101 505 aaKnown RBP15.19■□□□□ 0.02
SS18-222ENST00000582792 AFF1P51825 1210 aaKnown RBP15.19■□□□□ 0.02
SS18-222ENST00000582792 EVCP57679 992 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 LETM2Q2VYF4 491 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 PLA2G4FQ68DD2 849 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 MRPL10Q7Z7H8 261 aaKnown RBP15.19■□□□□ 0.02
SS18-222ENST00000582792 NKD2Q969F2 451 aaPredicted RBP15.19■□□□□ 0.02
SS18-222ENST00000582792 RSAD1Q9HA92 442 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 KCNK12Q9HB15 430 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 MRPL17Q9NRX2 175 aaKnown RBP15.19■□□□□ 0.02
SS18-222ENST00000582792 KANSL3Q9P2N6 904 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 COL4A3BPQ9Y5P4 624 aa15.19■□□□□ 0.02
SS18-222ENST00000582792 CNTNAP2Q9UHC6 1331 aa15.18■□□□□ 0.02
SS18-222ENST00000582792 NRP1O14786 923 aa15.18■□□□□ 0.02
SS18-222ENST00000582792 CCT2P78371 535 aaKnown RBP15.18■□□□□ 0.02
SS18-222ENST00000582792 C8orf34Q49A92 452 aa15.18■□□□□ 0.02
SS18-222ENST00000582792 SRGAP1Q7Z6B7 1085 aa15.18■□□□□ 0.02
SS18-222ENST00000582792 CCDC105Q8IYK2 499 aa15.18■□□□□ 0.02
SS18-222ENST00000582792 BLIDQ8IZY5 108 aa15.18■□□□□ 0.02
SS18-222ENST00000582792 CMASQ8NFW8 434 aaPredicted RBP15.18■□□□□ 0.02
SS18-222ENST00000582792 SLC7A3Q8WY07 619 aa15.18■□□□□ 0.02
SS18-222ENST00000582792 FAM193BQ96PV7 902 aaPredicted RBP15.18■□□□□ 0.02
SS18-222ENST00000582792 RTP3Q9BQQ7 232 aa15.18■□□□□ 0.02
SS18-222ENST00000582792 IGSF9Q9P2J2 1179 aa15.18■□□□□ 0.02
SS18-222ENST00000582792 FAN1Q9Y2M0 1017 aa15.18■□□□□ 0.02
SS18-222ENST00000582792 SOD2P04179 222 aa15.17■□□□□ 0.02
SS18-222ENST00000582792 HOXA11P31270 313 aaPredicted RBP15.17■□□□□ 0.02
SS18-222ENST00000582792 QARSP47897 775 aaKnown RBP15.17■□□□□ 0.02
SS18-222ENST00000582792 NPEPPSP55786 919 aa15.17■□□□□ 0.02
SS18-222ENST00000582792 UBXN11Q5T124 520 aa15.17■□□□□ 0.02
SS18-222ENST00000582792 EXOC8Q8IYI6 725 aa15.17■□□□□ 0.02
SS18-222ENST00000582792 TRIM22Q8IYM9 498 aa15.17■□□□□ 0.02
SS18-222ENST00000582792 SIX5Q8N196 739 aa15.17■□□□□ 0.02
SS18-222ENST00000582792 DAGLBQ8NCG7 672 aa15.17■□□□□ 0.02
SS18-222ENST00000582792 DDX25Q9UHL0 483 aaKnown RBP15.17■□□□□ 0.02
SS18-222ENST00000582792 FBXL21Q9UKT6 434 aa15.17■□□□□ 0.02
SS18-222ENST00000582792 PPME1Q9Y570 386 aa15.17■□□□□ 0.02
SS18-222ENST00000582792 EML1O00423 815 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 C2CD2LO14523 706 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 DKC1O60832 514 aaKnown RBP eCLIP15.16■□□□□ 0.02
SS18-222ENST00000582792 N4BP1O75113 896 aaKnown RBP15.16■□□□□ 0.02
SS18-222ENST00000582792 POMCP01189 267 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 URODP06132 367 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 ADH1AP07327 375 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 NCLP19338 710 aaKnown RBP15.16■□□□□ 0.02
SS18-222ENST00000582792 PSMA5P28066 241 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 SSRP1Q08945 709 aaKnown RBP15.16■□□□□ 0.02
SS18-222ENST00000582792 PPP2R5CQ13362 524 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 NONOQ15233 471 aaKnown RBP eCLIP15.16■□□□□ 0.02
SS18-222ENST00000582792 ANGPT1Q15389 498 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 NPY5RQ15761 445 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 CYP26C1Q6V0L0 522 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 FAM177A1Q8N128 213 aaPredicted RBP15.16■□□□□ 0.02
SS18-222ENST00000582792 ADSSL1Q8N142 457 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
SS18-222ENST00000582792 DTWD2Q8NBA8 298 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 PRPF31Q8WWY3 499 aaKnown RBP15.16■□□□□ 0.02
SS18-222ENST00000582792 PSPC1Q8WXF1 523 aaKnown RBP15.16■□□□□ 0.02
SS18-222ENST00000582792 CEP170P1Q96L14 293 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 RPS6KC1Q96S38 1066 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 HERC2P3Q9BVR0 1158 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 RHOBTB2Q9BYZ6 727 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 DHX33Q9H6R0 707 aaKnown RBP15.16■□□□□ 0.02
SS18-222ENST00000582792 MINDY3Q9H8M7 445 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 UBN1Q9NPG3 1134 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 MAN1C1Q9NR34 630 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 MARCH5Q9NX47 278 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 VAV3Q9UKW4 847 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 SSX2IPQ9Y2D8 614 aa15.16■□□□□ 0.02
SS18-222ENST00000582792 TEX28O15482 410 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 NARSO43776 548 aaKnown RBP15.15■□□□□ 0.02
SS18-222ENST00000582792 SLC37A4O43826 429 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 DEXIO95424 95 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 EFEMP2O95967 443 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 SRGAP2CP0DJJ0 459 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 RFC5P40937 340 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 AK2P54819 239 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 LAMTOR4Q0VGL1 99 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 GALNT17Q6IS24 598 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 ELMSAN1Q6PJG2 1045 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 TAS1R1Q7RTX1 841 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 COLGALT2Q8IYK4 626 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 RNF168Q8IYW5 571 aaPredicted RBP15.15■□□□□ 0.02
SS18-222ENST00000582792 CNNM3Q8NE01 707 aa15.15■□□□□ 0.02
SS18-222ENST00000582792 TMEM143Q96AN5 459 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms