RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 DSC3Q14574 896 aa13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 PCBP1Q15365 356 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 CDCA2Q69YH5 1023 aaPredicted RBP13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 PHOSPHO2Q8TCD6 241 aa13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 SPIRE2Q8WWL2 714 aa13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 DNAJC19Q96DA6 116 aa13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 ADAM2Q99965 735 aa13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 FZD8Q9H461 694 aa13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 GOLPH3LQ9H4A5 285 aa13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 PARVGQ9HBI0 331 aa13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 KMT5AQ9NQR1 393 aa13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 CHST12Q9NRB3 414 aa13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 LARSQ9P2J5 1176 aaKnown RBP13.29□□□□□ -0.28
SNRPD1-204ENST00000582475 TANC1Q9C0D5 1861 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 DENND3A2RUS2 1198 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 K7ERI5 159 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 ACTN4O43707 911 aaKnown RBP13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 GADD45BO75293 160 aaPredicted RBP13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 TBCAO75347 108 aaKnown RBP13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 PRPF40AO75400 957 aaKnown RBP13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 AMHP03971 560 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 AFMP43652 599 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 ZNF131P52739 623 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 EFNA5P52803 228 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 TMEM87AQ8NBN3 555 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 LINC01599Q8WXQ3 324 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 PAGE5Q96GU1 130 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 C7orf25Q9BPX7 421 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 KIFC3Q9BVG8 833 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 TMEM134Q9H6X4 195 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 RGS18Q9NS28 235 aa13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 PRMT7Q9NVM4 692 aaPredicted RBP13.28□□□□□ -0.28
SNRPD1-204ENST00000582475 GRXCR1A8MXD5 290 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 ACKR2O00590 384 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 SLC16A4O15374 487 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 TRAK2O60296 914 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 ERLIN2O94905 339 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 PRKCBP05771 671 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 IDEP14735 1019 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 ATP2A2P16615 1042 aaKnown RBP13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 LIG1P18858 919 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 AXLP30530 894 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 HOXA11P31270 313 aaPredicted RBP13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 FAM189BP81408 668 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 DEFB103AP81534 67 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 MAPK6Q16659 721 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 AMHR2Q16671 573 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 FAM187BQ17R55 369 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 LRIT3Q3SXY7 679 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 HERC4Q5GLZ8 1057 aaPredicted RBP13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 SLC24A5Q71RS6 500 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 CCDC65Q8IXS2 484 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 MYOCDQ8IZQ8 938 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 CNNM3Q8NE01 707 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 TOP1MTQ969P6 601 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 SLC9A7Q96T83 725 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 TRIM9Q9C026 710 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 C1orf112Q9NSG2 853 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 AGPAT5Q9NUQ2 364 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 PANK4Q9NVE7 773 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 DACT1Q9NYF0 836 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 ARHGAP28Q9P2N2 729 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 PIN4Q9Y237 131 aaKnown RBP13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 ADGRA3Q8IWK6 1321 aa13.27□□□□□ -0.29
SNRPD1-204ENST00000582475 C9IYK1 514 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 TSPAN1O60635 241 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 UPP2O95045 317 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 SIP14410 1827 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 GAP43P17677 238 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 IBSPP21815 317 aaPredicted RBP13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 CASP1P29466 404 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 NCKAP1LP55160 1127 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 ASIC1P78348 528 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 MMRN1Q13201 1228 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 SNW1Q13573 536 aaKnown RBP13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 CUL4BQ13620 913 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 TWF2Q6IBS0 349 aaKnown RBP13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 CNNM4Q6P4Q7 775 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 KRBA2Q6ZNG9 492 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 FAM178BQ8IXR5 827 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 GRAMD1CQ8IYS0 662 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 FMR1NBQ8N0W7 255 aaPredicted RBP13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 TMEM161BQ8NDZ6 487 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 ENGASEQ8NFI3 743 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 CPB2Q96IY4 423 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 PRIMPOLQ96LW4 560 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 CCDC113Q9H0I3 377 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 BLZF1Q9H2G9 400 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 RYDENQ9NUL5 291 aaKnown RBP13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 PCDHB7Q9Y5E2 793 aa13.26□□□□□ -0.29
SNRPD1-204ENST00000582475 PHLPP2Q6ZVD8 1323 aa13.25□□□□□ -0.29
SNRPD1-204ENST00000582475 A0A0U1RQF3 1178 aa13.25□□□□□ -0.29
SNRPD1-204ENST00000582475 A0A1B0GUA9 196 aa13.25□□□□□ -0.29
SNRPD1-204ENST00000582475 FRMD3A2A2Y4 597 aa13.25□□□□□ -0.29
SNRPD1-204ENST00000582475 H0YCG3 227 aa13.25□□□□□ -0.29
SNRPD1-204ENST00000582475 B4GALT5O43286 388 aa13.25□□□□□ -0.29
SNRPD1-204ENST00000582475 GTPBP6O43824 516 aaPredicted RBP13.25□□□□□ -0.29
SNRPD1-204ENST00000582475 STAG3L1P0CL83 205 aa13.25□□□□□ -0.29
SNRPD1-204ENST00000582475 MAPTP10636 758 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms