RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 NOC2LQ9Y3T9 749 aaKnown RBP10.48□□□□□ -0.73
RFFL-210ENST00000582308 UBE4BO95155 1302 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 PHLPP2Q6ZVD8 1323 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 ZMYM2Q9UBW7 1377 aa10.48□□□□□ -0.73
RFFL-210ENST00000582308 CITO14578 2027 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 TRIM43BA6NCK2 446 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 ANKRD63C9JTQ0 380 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 ACKR2O00590 384 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 KIAA0355O15063 1070 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 B4GALT5O43286 388 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 TGFB1I1O43294 461 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 SELPP16109 830 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 CYP2C18P33260 490 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 PMS1P54277 932 aaKnown RBP10.47□□□□□ -0.73
RFFL-210ENST00000582308 LPIN1Q14693 890 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 MAPK6Q16659 721 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 ANO6Q4KMQ2 910 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 FBXO47Q5MNV8 452 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 CENPPQ6IPU0 288 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 SLC39A4Q6P5W5 647 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 LRRC8DQ7L1W4 858 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 FAM228AQ86W67 206 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 MAP4K3Q8IVH8 894 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 NELFBQ8WX92 580 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 TRIM43Q96BQ3 446 aaPredicted RBP10.47□□□□□ -0.73
RFFL-210ENST00000582308 DHTKD1Q96HY7 919 aaPredicted RBP10.47□□□□□ -0.73
RFFL-210ENST00000582308 ACO2Q99798 780 aaKnown RBP10.47□□□□□ -0.73
RFFL-210ENST00000582308 TARS2Q9BW92 718 aaKnown RBP10.47□□□□□ -0.73
RFFL-210ENST00000582308 PPP1R12CQ9BZL4 782 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 WNT8AQ9H1J5 351 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 DNAJC25Q9H1X3 360 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 AGO3Q9H9G7 860 aaKnown RBP10.47□□□□□ -0.73
RFFL-210ENST00000582308 PRMT7Q9NVM4 692 aaPredicted RBP10.47□□□□□ -0.73
RFFL-210ENST00000582308 ANK1P16157 1881 aa10.47□□□□□ -0.73
RFFL-210ENST00000582308 TISP43B9A030 160 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 PSMA7O14818 248 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 TSPAN1O60635 241 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 PIGRP01833 764 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 GHRP10912 638 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 ARF4P18085 180 aaPredicted RBP10.46□□□□□ -0.73
RFFL-210ENST00000582308 CCNE1P24864 410 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 ITGB8P26012 769 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 HOXA11P31270 313 aaPredicted RBP10.46□□□□□ -0.73
RFFL-210ENST00000582308 ABCD1P33897 745 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 PPP1R2P41236 205 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 STRN3Q13033 797 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 STIM1Q13586 685 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 ZCWPW2Q504Y3 356 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 ANKRD40Q6AI12 368 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 TTI2Q6NXR4 508 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 CATSPER4Q7RTX7 472 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 SYCP3Q8IZU3 236 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 P2RX5Q93086 422 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 ZBTB45Q96K62 511 aaPredicted RBP10.46□□□□□ -0.73
RFFL-210ENST00000582308 MRPL4Q9BYD3 311 aaKnown RBP10.46□□□□□ -0.73
RFFL-210ENST00000582308 TMEM206Q9H813 350 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 ERVK-5Q9HDB9 667 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 CTNND2Q9UQB3 1225 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 SQORQ9Y6N5 450 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 CNTNAP2Q9UHC6 1331 aa10.46□□□□□ -0.73
RFFL-210ENST00000582308 LTBP2Q14767 1821 aa10.46□□□□□ -0.74
RFFL-210ENST00000582308 MICAL3Q7RTP6 2002 aa10.46□□□□□ -0.74
RFFL-210ENST00000582308 CEP290O15078 2479 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 TRIM49BA6NDI0 452 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 PDXKO00764 312 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 HNRNPDLO14979 420 aaKnown RBP10.45□□□□□ -0.74
RFFL-210ENST00000582308 NBNO60934 754 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 RPS6KA5O75582 802 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 KIF20AO95235 890 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 TIMP1P01033 207 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 SFPQP23246 707 aaKnown RBP eCLIP10.45□□□□□ -0.74
RFFL-210ENST00000582308 ERCC5P28715 1186 aaPredicted RBP10.45□□□□□ -0.74
RFFL-210ENST00000582308 ADSSP30520 456 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 CD52P31358 61 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 CCL23P55773 120 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 STX17P56962 302 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 PAK1Q13153 545 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 PRPF4BQ13523 1007 aaKnown RBP10.45□□□□□ -0.74
RFFL-210ENST00000582308 PCBP1Q15365 356 aaKnown RBP eCLIP10.45□□□□□ -0.74
RFFL-210ENST00000582308 CT47A1Q5JQC4 288 aaPredicted RBP10.45□□□□□ -0.74
RFFL-210ENST00000582308 ATF7IP2Q5U623 682 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 EEF1DP3Q658K8 133 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 ZPBP2Q6X784 338 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 TSHZ1Q6ZSZ6 1077 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 USP38Q8NB14 1042 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 VWCEQ96DN2 955 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 BICD1Q96G01 975 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 SCLYQ96I15 445 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 CPB2Q96IY4 423 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 PRIMPOLQ96LW4 560 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 DUSP9Q99956 384 aaKnown RBP10.45□□□□□ -0.74
RFFL-210ENST00000582308 ANP32EQ9BTT0 268 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 HAPLN2Q9GZV7 340 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 GBP3Q9H0R5 595 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 TMX1Q9H3N1 280 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 TSPY26PQ9H489 355 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 PTPRHQ9HD43 1115 aa10.45□□□□□ -0.74
RFFL-210ENST00000582308 PRDM5Q9NQX1 630 aaPredicted RBP10.45□□□□□ -0.74
RFFL-210ENST00000582308 AGPAT3Q9NRZ7 376 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms